B1IFJ8 (B1IFJ8_CLOBK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 4 EMBL ACA43538.1

Gene names

Ordered Locus Names:

CLD_1160

Organism

Clostridium botulinum (strain Okra / Type B1) [Complete proteome] [HAMAP]

Taxonomic identifier

498213 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	445 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ACA43538.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1IFJ8 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 2EB6B8609B3B78D3	FASTA	445	49,993
	10 20 30 40 50 60 MDNGIKIVTI GGGSSYTPEL VEGFIKRYNE LPVRELWLVD IEEGREKLQI VGNLAKRMVK 70 80 90 100 110 120 KAGIPMEIHL TIDRKKALKD ADFVTTQIRV GLLDARIKDE KIPLNHGVIG QETNGAGGMF 130 140 150 160 170 180 KALRTIPVIL DIDKDMSKLC PNAWMINFTN PAGMVTEALL RYGKNKKVIG LCNVPIGMEK 190 200 210 220 230 240 AAAKVLEVEN KRLRIDFVGL NHMVFGKEVY VDGIKVTDKL INLLADGNIG QIVKNVSDFT 250 260 270 280 290 300 WNKDFIKALG MMPCPYHKYY FQTKDMLKEE LEQFSKGKTR AEIVKKVEEE LFKLYKNENL 310 320 330 340 350 360 DIKPPELEKR GGAYYSDAAC RLICSIYNDK KDVQPVNVRN DGAIIGIPNE SAIEISCMIT 370 380 390 400 410 420 RDGPKAIAVG ELPIAINGLI QQIKTFERLV VDSAVFGDYY KAILALTVNP LVQSDKLAKT 430 440 LVDELMIAHK DYLPQFKELI EENFK

References

[1]

"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000939 Genomic DNA. Translation: ACA43538.1.
RefSeq	YP_001782985.1. NC_010516.1.
3D structure databases
ProteinModelPortal	B1IFJ8.
SMR	B1IFJ8. Positions 5-436.
ModBase	Search...
Protein-protein interaction databases
STRING	B1IFJ8.
Protein family/group databases
CAZy	GH4. Glycoside Hydrolase Family 4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6149701.
GenomeReviews	Gene locus CLD_1160 in contig CP000939_GR.
KEGG	cbb:CLD_1160.
PATRIC	19407182. VBICloBot127283_3464.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG511715.
OMA	AKDERIP.
ProtClustDB	CLSK972417.
Family and domain databases
InterPro	IPR019802. GlycHydrolase_4_CS. IPR001088. Glyco_hydro_4. IPR022616. Glyco_hydro_4_C. IPR015955. Lactate_DH/Glyco_Ohase_4_C. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.90.110.10. lact_mal_DH. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K01222.
Pfam	PF02056. Glyco_hydro_4. 1 hit. PF11975. Glyco_hydro_4C. 1 hit. [Graphical view]
PRINTS	PR00732. GLHYDRLASE4.
SUPFAM	SSF56327. Lactate_DH/Glyco_hydro_4_C. 1 hit.
PROSITE	PS01324. GLYCOSYL_HYDROL_F4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1IFJ8_CLOBK

Accession

Primary (citable) accession number: B1IFJ8

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)