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B1IFH2 (B1IFH2_CLOBK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Glycosyl transferase, group 36 family protein EMBL ACA43820.1
Gene names
Ordered Locus Names:CLD_1186
OrganismClostridium botulinum (strain Okra / Type B1) [Complete proteome] [HAMAP]
Taxonomic identifier498213 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length2882 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ACA43820.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1IFH2 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 54289A18F08A8CFD

FASTA2,882333,986
        10         20         30         40         50         60 
MTVFIPIYVS LIILIVLAYL IYLIYKNNQS KESLIDDINN IFLGEDKQDL EQFAEDISEF 

        70         80         90        100        110        120 
HSIVSNRKCR KLVLENLDKS YERIMNNYKY IVSLDEDINM TVPAGEWLLD NIYLIEKQYK 

       130        140        150        160        170        180 
DIKKNMPSSH YVKLPVINKG IMKCYPRVYH LALAIIHNFR GNMDKDFIIT FMSEYQKNNV 

       190        200        210        220        230        240 
LTSSEVWALP IMLRIALIQK ISIITEEITY IQRERKRGEE LADKIIKDYN NRDLEKTIDE 

       250        260        270        280        290        300 
LKDKGINISP YFMETFINII NDNGIKDEKL NLFIQEQLEV KEKNINNIIN LGYRKQSKQQ 

       310        320        330        340        350        360 
IVMGNCINGL RHIEAINWKN VFSNVSAIEE ILKEDPLKVY NDMDFPSKDF YRNKIERLSR 

       370        380        390        400        410        420 
KLKLPESYIA KKSIECAQQF EVKAEEDNYK KHVGYYIVEE KGARLLKKVL GVKSEGKDKI 

       430        440        450        460        470        480 
KDFLIKNKVR SYVTSIIVFT ALFEFLIIKS IGYKNAYIML LQFIVFLIPS SEIIVSILNW 

       490        500        510        520        530        540 
SLNNLTKPDF IPKLQFGNGI TEESSTVVVI PTLIGSKKRA KELVKEMEVY YLANKEDNIY 

       550        560        570        580        590        600 
FAVLGDFKDS KSEKEKDDEE IIKEMLCEVK ELNNKYCKEG EEIFFFLNRY RQYNEKEKIW 

       610        620        630        640        650        660 
MGWERKRGKL EEFNKLIRGE KNTSYNIISR DINILKKVKY VITLDADTKL PRDVAKRLIG 

       670        680        690        700        710        720 
AMEHPLNKPI INSVKKSVIH GYGLMQPRVS IGVEDANKTL FSKIFSGQVG LDTYTTAVSD 

       730        740        750        760        770        780 
IYQDLFKEGI FTGKGIYHVD TFNTMLSGEI KENSVLSHDL LEGSYVRTAL VTDIELVDGY 

       790        800        810        820        830        840 
PAYYNSSCKR LHRWVRGDWQ LIPWIFKRTS INRLSKWKIV DNLRRSLLAP SVVILILISL 

       850        860        870        880        890        900 
FSHYGTNEMI TVAFLSVIAP ILFNISEVII FPSKGIGLSG RIYSVKNVLK QFFLIFAFIP 

       910        920        930        940        950        960 
HRAYLMIDAI IRTLYRLLIS KKNLLEWQTA EEAEKTSRKD LKGYIKSMWV GSLIALLILY 

       970        980        990       1000       1010       1020 
LSIRKSNELA ILLVPACIIW FISPYIAFYV SRDMKDKLYL NKDNRRLLVN IARRTWAYFE 

      1030       1040       1050       1060       1070       1080 
DFVCEDTNWL APDNYQEEPY KGIAYRTSPT NIGMGITSNI VAYDLGFITL KNVINRLENI 

      1090       1100       1110       1120       1130       1140 
LFSMNKLDKY EGHFYNWYDI KTGKPLNPRY ISAVDSGNLV GYLWLTEESL KDIINKPLLS 

      1150       1160       1170       1180       1190       1200 
KKNIDGLLSL LELANEELKK EEDIDNFYFN IMFILKEMEP DIVFINNIFI KILNKQKELE 

      1210       1220       1230       1240       1250       1260 
NFNIDINKFY WNKKLYDFLN ESLQEFKKLI PWKDQIIENI GICKDVIEEI REFVTKVPIQ 

      1270       1280       1290       1300       1310       1320 
KMPNKINCII KNLEQIKTDD NYEREWLLNF IKNLNISSEN IKNLIQNIHE LNFKLDELAK 

      1330       1340       1350       1360       1370       1380 
NTDFKILYNE DRKLFTIGYN IDSGEDGNSY YDLLASEARQ ASFVAIAKGD IPQDNWITLG 

      1390       1400       1410       1420       1430       1440 
RAITYMGKKL KGLASWSGTM FEYFMPLLIM KNYEGTLLDQ TYKSVIKGQQ LYAKDKKIPW 

      1450       1460       1470       1480       1490       1500 
GISESAFYHF DGDKNYQYMA FGVPGIGIKR GLSKDLVISP YSTVLALQKD VIGSIENINR 

      1510       1520       1530       1540       1550       1560 
LIDCELLDKY GFYEAVDYTK NRLPKGKSKA IIKSFMVHHQ GMSLMALNNT LNNNILQNRF 

      1570       1580       1590       1600       1610       1620 
HNKPEVKATE LLLQERENNR IIYDRSIKKY NTELKLHDID QYSRIYNTAK TDIPRVGVLS 

      1630       1640       1650       1660       1670       1680 
NGSYSLMLSN RGGGYSKKDD ITIYRWREDL TSDSKGLFLY IKNINANNYW SATYEPCKSE 

      1690       1700       1710       1720       1730       1740 
GEHYKVKFYS DKIIFAREDG NITTETHVTV SQEEDAEIRS INLKNNSNHD RVIEVTSYCE 

      1750       1760       1770       1780       1790       1800 
ATLANYNTDL VHPSFSNLFV KTELREDPFC LLANRRKRSE KDISPWLMQT VAVEGDQIGG 

      1810       1820       1830       1840       1850       1860 
FQYETSRIDF IGRGRNLYNP QAMDNETNLK GSIGPVLDPI ISIRTRVRLK AKENCTVAYT 

      1870       1880       1890       1900       1910       1920 
TAFCNSKEEG VKIAEKYRNI DNVKNAFNLS WSHSNLEMKH LGIRSTAANM YQYILSNILF 

      1930       1940       1950       1960       1970       1980 
INRNIKEREK YIKDIKLGQS NLWSYGISGD YPIVLVTLDK ESEVDIVRQL LLTYKYWRMK 

      1990       2000       2010       2020       2030       2040 
NINVDLIIVN TKESSYTKPI EDSILNLVNS LGLMNNINKS AGVFLFNKPT MKEDDLNLLK 

      2050       2060       2070       2080       2090       2100 
AICRLYIDCN KGSLAEQIDT GNNKSKELNL LEKKEIEYTV NPYKFKVSKL EYFNDIGGFD 

      2110       2120       2130       2140       2150       2160 
IENNEYTIVL EDYNNTPLPW INVMSNSNFG FHVSESGSSY SWYKNSRENK LTNWCNDPVV 

      2170       2180       2190       2200       2210       2220 
DGESEHIYIR DEVTGEIWSI TPKPIRDEGQ YIINHGFGYS NFKHYREGVI GEITSYCPIG 

      2230       2240       2250       2260       2270       2280 
DNCKISLIKL KNNTDIKRKI SVTYYASTVL GVSKQLSSPY ISTYLDKDNF IYSRNPYNSS 

      2290       2300       2310       2320       2330       2340 
FKETTAYLKI VGGKEESFTG DRKEFLGIDG TIEKPKALNY EKLSNEVGAG IDPCMAENSK 

      2350       2360       2370       2380       2390       2400 
ITLEPNEEKV LIAILGAEDS IEAVKENINK YDNEIIAFKE LNNTKNYWKK ITETIKVKTP 

      2410       2420       2430       2440       2450       2460 
DKSMDLMLNG WLLYQVIVCR LWARTAFYQS GGAYGFRDQL QDVMSVCYID PDITKKQIIY 

      2470       2480       2490       2500       2510       2520 
SSSRQFREGD VQHWWHPVVE SGIRTRFSDD LLWLPYVTID YIKNTGDYSI LEESSNYLEE 

      2530       2540       2550       2560       2570       2580 
PLLREGEDER YNVASVSSEK GTIYEHCIRA INRALKFGEH NIPLMGSGDW NDGMSTVGNQ 

      2590       2600       2610       2620       2630       2640 
GRGESVWLGW FLYTILESFI NICDYKKDTV NMKRYEEYLQ FIKENIEENA WDGSWYRRAY 

      2650       2660       2670       2680       2690       2700 
FDDGTLLGSI ENEECTIDSL SQSWSVLSGA GKEFRVKEAM AAVERNLIKK DKGIIALLTP 

      2710       2720       2730       2740       2750       2760 
AFDKSTLQPG YIKGYLPGVR ENGGQYTHAA IWVVLAFSKL KMEDKAWSLF NMINPINHTK 

      2770       2780       2790       2800       2810       2820 
SYFNCQNYKV EPYVMTADIY DVEPHIGRGG WSWYTGAASW MYRTGIEGIL GLKLKGKDGF 

      2830       2840       2850       2860       2870       2880 
YVDPCIPKDW SEYEIIYNRG NCRYNIKVIR ENKKELWIDG ELKEGNIIPI FEEGTHEIKV 


II

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References

[1]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000939 Genomic DNA. Translation: ACA43820.1.
RefSeqYP_001782959.1. NC_010516.1.

3D structure databases

ProteinModelPortalB1IFH2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1IFH2.

Protein family/group databases

CAZyGH94. Glycoside Hydrolase Family 94.
GT84. Glycosyltransferase Family 84.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6148993.
GenomeReviewsGene locus CLD_1186 in contig CP000939_GR.
KEGGcbb:CLD_1186.
PATRIC19407132. VBICloBot127283_3439.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG294780.
OMAGGDWNDG.
ProtClustDBCLSK882486.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR009342. Carb-bd_put_dom.
IPR019282. DUF2329.
IPR011013. Glyco_hydro-type_carb-bd.
IPR010383. Glyco_transf_36.
IPR010403. GT36_AF.
[Graphical view]
PfamPF06204. CBM_X. 2 hits.
PF10091. DUF2329. 1 hit.
PF06165. Glyco_transf_36. 2 hits.
PF06205. GT36_AF. 2 hits.
[Graphical view]
SMARTSM01068. CBM_X. 2 hits.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 2 hits.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1IFH2_CLOBK
AccessionPrimary (citable) accession number: B1IFH2
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info