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B1IDQ2 (B1IDQ2_CLOBK) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CLD_0120
OrganismClostridium botulinum (strain Okra / Type B1) [Complete proteome] [HAMAP]
Taxonomic identifier498213 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length218 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionMethyltransferase EMBL ACA46289.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbase-excision repair

Inferred from electronic annotation. Source: InterPro

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

methyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1IDQ2 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: D2C786AF2A069E68

FASTA21825,106
        10         20         30         40         50         60 
MYFEYGREET EFLKSRDELL GAAIDRIGHI YRAVDSDLFS SVVHHIIGQQ ISTRAQATIW 

        70         80         90        100        110        120 
KRLEDRLEIV DADAICSLEL EELQRLGMTF KKAEYIKGFA QKVKNKKFDV EALNNLPDSE 

       130        140        150        160        170        180 
VIKELSALKG IGIWTAGMII IFCMQRPDII SFGDLAIQRG MRMLYHHRSI HRKKFTKYAR 

       190        200        210 
RYSPYGTVAG LYLWAIAGGA IPEMRDYAPK KKKEVTKK 

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References

[1]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000939 Genomic DNA. Translation: ACA46289.1.
RefSeqYP_001780275.1. NC_010516.1.

3D structure databases

ProteinModelPortalB1IDQ2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1IDQ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6149887.
GenomeReviewsGene locus CLD_0120 in contig CP000939_GR.
KEGGcbb:CLD_0120.
PATRIC19401805. VBICloBot127283_0807.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG544181.
OMAKGIGNWT.
ProtClustDBCLSK888982.

Family and domain databases

InterProIPR011257. DNA_glycosylase.
IPR003265. HhH-GPD_domain.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR023170. HTH_base_excis_C.
[Graphical view]
Gene3DG3DSA:1.10.340.30. DNA_glycosylase. 1 hit.
G3DSA:1.10.1670.10. HTH_base_excis_C. 1 hit.
KOK01247.
PfamPF00730. HhH-GPD. 1 hit.
[Graphical view]
SMARTSM00478. ENDO3c. 1 hit.
SM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMSSF48150. DNA_glycsylse. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1IDQ2_CLOBK
AccessionPrimary (citable) accession number: B1IDQ2
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)