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B1ICY4 (WHIA_STRPI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative sporulation transcription regulator WhiA
Gene names
Name:whiA
Ordered Locus Names:SPH_1678
OrganismStreptococcus pneumoniae (strain Hungary19A-6) [Complete proteome] [HAMAP]
Taxonomic identifier487214 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be required for sporulation By similarity. HAMAP-Rule MF_01420

Sequence similarities

Belongs to the WhiA transcriptional regulatory family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 303303Putative sporulation transcription regulator WhiA HAMAP-Rule MF_01420
PRO_0000376580

Regions

DNA binding272 – 30332H-T-H motif Potential

Sequences

Sequence LengthMass (Da)Tools
B1ICY4 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: AA07C116DB5C7900

FASTA30334,119
        10         20         30         40         50         60 
MSFTVAVKEE ILGQHHLSWH ELSAIIKMSG NIGLSTSGLT LSVVTENAKL ARHLYESFLH 

        70         80         90        100        110        120 
FYEIKSEIRH HQRSNLRKNR VYTVFTDEKV QDLLSDLHLA DSFFGLETGI DEAILSDEEA 

       130        140        150        160        170        180 
GRAYLCGAFL ANGSIRDPES GKYQLEISSV YLDHAQGIAS LLQQFLLDAK VLERKKGAVT 

       190        200        210        220        230        240 
YLQRAEDIMD FLIVIGAMQA RDDFERVKIL RETRNDLNRA NNAETANIAR TVSASMKTIN 

       250        260        270        280        290        300 
NISKIKDIMG LENLPVDLQE VAQLRIQHPD YSIQQLADSL STPLTKSGVN HRLRKINKIA 


DEL 

« Hide

References

[1]"Complete sequence of Streptococcus pneumoniae strain Hungary 19A-6."
Hotopp J.D., Censini S., Masignani V., Covacci A., Tettelin H.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hungary19A-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000936 Genomic DNA. Translation: ACA35599.1.
RefSeqYP_001694969.1. NC_010380.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING487214.SPH_1678.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA35599; ACA35599; SPH_1678.
GeneID6028204.
KEGGspv:SPH_1678.
PATRIC19693462. VBIStrPne34925_1681.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1481.
HOGENOMHOG000040187.
KOK09762.
OMAHKFMLDA.
OrthoDBEOG68WR87.

Enzyme and pathway databases

BioCycSPNE487214:GHY0-1647-MONOMER.

Family and domain databases

Gene3D3.10.28.10. 1 hit.
HAMAPMF_01420. HTH_type_WhiA.
InterProIPR027434. Homing_endonucl.
IPR003802. Sporulation_regulator_WhiA.
IPR023054. Sporulation_regulator_WhiA_C.
IPR018478. Sporulation_regulator_WhiA_N.
[Graphical view]
PfamPF02650. HTH_WhiA. 1 hit.
PF10298. WhiA_N. 1 hit.
[Graphical view]
SUPFAMSSF55608. SSF55608. 1 hit.
TIGRFAMsTIGR00647. MG103. 1 hit.
ProtoNetSearch...

Entry information

Entry nameWHIA_STRPI
AccessionPrimary (citable) accession number: B1ICY4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families