B1I4X2 (MURI_DESAP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glutamate racemase
EC=5.1.1.3

Gene names

Name:	murI
Ordered Locus Names:	Daud_1508

Organism

Desulforudis audaxviator (strain MP104C) [Complete proteome] [HAMAP]

Taxonomic identifier

477974 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Candidatus Desulforudis

Protein attributes

Sequence length	273 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258
Catalytic activity	L-glutamate = D-glutamate. HAMAP MF_00258
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258
Sequence similarities	Belongs to the aspartate/glutamate racemases family.

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation Peptidoglycan synthesis
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 273	273	Glutamate racemase HAMAP MF_00258		PRO_1000114040

Sequences

	Sequence		Length	Mass (Da)
	B1I4X2 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 72341ADBECC5091F	FASTA	273	29,306
	10 20 30 40 50 60 MAKGTVGLFD SGVGGLTVVR EVSVILPGKR VIYFGDTAHV PYGDKSVDEL LSYAERIIGF 70 80 90 100 110 120 LCSQGADYII FACNTSSAVS LRLMRDRFQV PMIGLIEPGA AEAVRLSATG RIGLIATEAT 130 140 150 160 170 180 VKAGAYARAV SALNRNCQVF SQAAPRLVPL VESGESDTPK AEQAVREYLE PLREQGIDTL 190 200 210 220 230 240 ILGCTHYPFL RDVIERVLGP EVVLVDPAAA TVRAARLDML RRGFSADNPG AQGEQDTVSL 250 260 270 RYFVSGSADA FRAVAGQFLG REPEPVTEIC LLR

References

[1]

"Complete sequence of chromosome of Desulforudis audaxviator MP104C." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D., Pitluck S., Lowry S.R., Larimer F., Land M.L., Hauser L., Kyrpides N., Ivanova N.N., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MP104C.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000860 Genomic DNA. Translation: ACA60014.1.
RefSeq	YP_001717646.1. NC_010424.1.
3D structure databases
ProteinModelPortal	B1I4X2.
ModBase	Search...
Protein-protein interaction databases
STRING	B1I4X2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6026253.
GenomeReviews	Gene locus Daud_1508 in contig CP000860_GR.
KEGG	dau:Daud_1508.
PATRIC	31969862. VBICanDes92303_1556.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG645102.
OMA	PQEDTIY.
ProtClustDB	CLSK2324481.
Enzyme and pathway databases
BioCyc	CDES477974:DAUD_1508-MONOMER.
Family and domain databases
HAMAP	MF_00258. Glu_racemase. [Tree]
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KO	K01776.
PANTHER	PTHR21198. PTHR21198. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
SUPFAM	SSF53681. Asp/Glu_race. 2 hits.
TIGRFAMs	TIGR00067. Glut_race. 1 hit.
PROSITE	PS00923. ASP_GLU_RACEMASE_1. False negative. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

MURI_DESAP

Accession

Primary (citable) accession number: B1I4X2

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program