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B1I4F5 (GLGA_DESAP) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Daud_1322
OrganismDesulforudis audaxviator (strain MP104C) [Complete proteome] [HAMAP]
Taxonomic identifier477974 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeCandidatus Desulforudis

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 500500Glycogen synthase HAMAP-Rule MF_00484
PRO_1000206426

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B1I4F5 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: A74192696BAD2F1C

FASTA50057,814
        10         20         30         40         50         60 
MFDRPLKILF VSSEVVPFAK TGGLADVAGS LPKALATVVD HGLSHHDVRV AMPRYKMIED 

        70         80         90        100        110        120 
ARYVTDFPVW FADKNHEAII RQREIEAQFQ GARHTVPVYM IDNYQYYYRD GIYVFDDEAE 

       130        140        150        160        170        180 
RFGFFCKAVL EMLPRLGWQP DVIHCNDWQC GPIPLFLKTH YRGDPFFSRM ATVFTIHNLQ 

       190        200        210        220        230        240 
YQGNFPKEVL HMLGLGKEYF RPEALEFYGS VSFMKAGIQY ADVLTTVSRT YAREIQTPEY 

       250        260        270        280        290        300 
GQRMEGVLRQ RAHELYGIVN GINYHEFDPK TDPRLHRNYD VDHWEHKKEN KFTLQREMNL 

       310        320        330        340        350        360 
PVRDVPVLGL ITRLVDQKGL DLIAEIIDEL MRLDIQMVIL GKGDKYYEDM FREMKVQHPG 

       370        380        390        400        410        420 
KIAAHIGFNV VLAQRIYAGS DMFLMPSRFE PCGLGQLISL RYGTIPIVRE TGGLADTVNE 

       430        440        450        460        470        480 
YDLATGGGNG FVFKEYDARA LYSAIARALK LYREDQEAWG RLVRNAMEMD FSWARSAVEY 

       490        500 
LQVYRDAMEK VSEERGIRIA 

« Hide

References

[1]"Complete sequence of chromosome of Desulforudis audaxviator MP104C."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D., Pitluck S., Lowry S.R., Larimer F., Land M.L., Hauser L., Kyrpides N., Ivanova N.N., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MP104C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000860 Genomic DNA. Translation: ACA59832.1.
RefSeqYP_001717464.1. NC_010424.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING477974.Daud_1322.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA59832; ACA59832; Daud_1322.
GeneID6026062.
KEGGdau:Daud_1322.
PATRIC31969454. VBICanDes92303_1364.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACRLTEQK.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK943626.

Enzyme and pathway databases

BioCycDAUD477974:GH0B-1351-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_DESAP
AccessionPrimary (citable) accession number: B1I4F5
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: April 29, 2008
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways