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Protein

Malate dehydrogenase

Gene

mdh

Organism
Desulforudis audaxviator (strain MP104C)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the reversible oxidation of malate to oxaloacetate.UniRule annotation

Catalytic activityi

(S)-malate + NAD+ = oxaloacetate + NADH.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei34NADUniRule annotation1
Binding sitei83SubstrateUniRule annotation1
Binding sitei89SubstrateUniRule annotation1
Binding sitei96NADUniRule annotation1
Binding sitei121SubstrateUniRule annotation1
Binding sitei152SubstrateUniRule annotation1
Active sitei176Proton acceptorUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi10 – 15NADUniRule annotation6
Nucleotide bindingi119 – 121NADUniRule annotation3

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
Biological processTricarboxylic acid cycle
LigandNAD

Enzyme and pathway databases

BioCyciCDES477974:G1GAD-1163-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Malate dehydrogenaseUniRule annotation (EC:1.1.1.37UniRule annotation)
Gene namesi
Name:mdhUniRule annotation
Ordered Locus Names:Daud_1121
OrganismiDesulforudis audaxviator (strain MP104C)
Taxonomic identifieri477974 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeCandidatus Desulforudis
Proteomesi
  • UP000008544 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001261311 – 309Malate dehydrogenaseAdd BLAST309

Proteomic databases

PRIDEiB1I3T1

Interactioni

Protein-protein interaction databases

STRINGi477974.Daud_1121

Structurei

3D structure databases

ProteinModelPortaliB1I3T1
SMRiB1I3T1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LDH/MDH superfamily. MDH type 3 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C80 Bacteria
COG0039 LUCA
HOGENOMiHOG000213794
KOiK00024
OMAiRQPGQTR
OrthoDBiPOG091H02N6

Family and domain databases

CDDicd01339 LDH-like_MDH, 1 hit
Gene3Di3.90.110.10, 1 hit
HAMAPiMF_00487 Malate_dehydrog_3, 1 hit
InterProiView protein in InterPro
IPR001557 L-lactate/malate_DH
IPR022383 Lactate/malate_DH_C
IPR001236 Lactate/malate_DH_N
IPR015955 Lactate_DH/Glyco_Ohase_4_C
IPR011275 Malate_DH_type3
IPR036291 NAD(P)-bd_dom_sf
PfamiView protein in Pfam
PF02866 Ldh_1_C, 1 hit
PF00056 Ldh_1_N, 1 hit
PIRSFiPIRSF000102 Lac_mal_DH, 1 hit
PRINTSiPR00086 LLDHDRGNASE
SUPFAMiSSF51735 SSF51735, 1 hit
SSF56327 SSF56327, 1 hit
TIGRFAMsiTIGR01763 MalateDH_bact, 1 hit

Sequencei

Sequence statusi: Complete.

B1I3T1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRKKISIVG AGNVGATCAH WIAAKELGDI VLLDVAEGVP QGKALDLMEA
60 70 80 90 100
APVEGFDCMI TGTNDYRDTA GSDVAVITAG VARKPGMSRD DLVSINVKIV
110 120 130 140 150
RQAAAEIARY SPDALIIVVT NPLDVMCYVA YKASGLPRGK VFGMSGILDG
160 170 180 190 200
ARFRTFVALE LGISFEDVTT LVLGGHGDHM VPLVRYTYAG AIPVEKLIPA
210 220 230 240 250
DRLAELVQRT RQGGAEIVEL LKTGSAYYAP GAAITQMLEA VLKDKKRILP
260 270 280 290 300
CAAYLDGEYG HRDICAGVPT IVGAGGIERI IELELTAEEQ AAFDRSVSAV

RGVLKGLDI
Length:309
Mass (Da):32,769
Last modified:April 29, 2008 - v1
Checksum:i777B2B4EEBF1F938
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000860 Genomic DNA Translation: ACA59632.1
RefSeqiWP_012302218.1, NC_010424.1

Genome annotation databases

EnsemblBacteriaiACA59632; ACA59632; Daud_1121
KEGGidau:Daud_1121

Similar proteinsi

Entry informationi

Entry nameiMDH_DESAP
AccessioniPrimary (citable) accession number: B1I3T1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: May 23, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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