ID   B1I253_DESAP            Unreviewed;       314 AA.
AC   B1I253;
DT   29-APR-2008, integrated into UniProtKB/TrEMBL.
DT   29-APR-2008, sequence version 1.
DT   27-MAR-2024, entry version 64.
DE   RecName: Full=DNA ligase D polymerase domain-containing protein {ECO:0000259|Pfam:PF21686};
GN   OrderedLocusNames=Daud_0598 {ECO:0000313|EMBL:ACA59132.1};
OS   Desulforudis audaxviator (strain MP104C).
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Peptococcaceae;
OC   Desulforudis.
OX   NCBI_TaxID=477974 {ECO:0000313|EMBL:ACA59132.1, ECO:0000313|Proteomes:UP000008544};
RN   [1] {ECO:0000313|Proteomes:UP000008544}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MP104C {ECO:0000313|Proteomes:UP000008544};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Pitluck S., Lowry S.R., Larimer F., Land M.L.,
RA   Hauser L., Kyrpides N., Ivanova N.N., Richardson P.;
RT   "Complete sequence of chromosome of Desulforudis audaxviator MP104C.";
RL   Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ACA59132.1, ECO:0000313|Proteomes:UP000008544}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MP104C {ECO:0000313|EMBL:ACA59132.1,
RC   ECO:0000313|Proteomes:UP000008544};
RX   PubMed=18845759; DOI=10.1126/science.1155495;
RA   Chivian D., Brodie E.L., Alm E.J., Culley D.E., Dehal P.S., Desantis T.Z.,
RA   Gihring T.M., Lapidus A., Lin L.H., Lowry S.R., Moser D.P.,
RA   Richardson P.M., Southam G., Wanger G., Pratt L.M., Andersen G.L.,
RA   Hazen T.C., Brockman F.J., Arkin A.P., Onstott T.C.;
RT   "Environmental genomics reveals a single-species ecosystem deep within
RT   Earth.";
RL   Science 322:275-278(2008).
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DR   EMBL; CP000860; ACA59132.1; -; Genomic_DNA.
DR   AlphaFoldDB; B1I253; -.
DR   STRING; 477974.Daud_0598; -.
DR   KEGG; dau:Daud_0598; -.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_1_0_9; -.
DR   OrthoDB; 9802472at2; -.
DR   Proteomes; UP000008544; Chromosome.
DR   CDD; cd04865; LigD_Pol_like_2; 1.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02778; ligD_pol; 1.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008544}.
FT   DOMAIN          40..293
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
SQ   SEQUENCE   314 AA;  35358 MW;  B5E7A3D517F03E9E CRC64;
     MRYLVPSFSK GDPLVPTVLI GRQKVDLTNL DKVFWPEGYT KGDLVNYYHR VAPYVLRYLR
     DRPIVMSRYP DGINGKHFYQ KERPEYTPDW IETVLVAHEG AQRVINYIVC RDEATLVWIA
     NQGAIEMHAW LGRAGRLEYP DLAVLDLDPA AGAKWRQVID VALLARTVLA EFGLAGFPKT
     SGATGVHVFI PLEPVHTYRE TTRAMEAVAR LVTGVCAFAT TERVIERRTG KVYIDYLQNT
     AGKTMAFPYS VRPLPSAPVS TPVTWEELED LKAAKGFNIK TVPERLQNLG DPYAGLFNRH
     YRLDALLELA PSPA
//