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B1I1U7 (B1I1U7_DESAP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:Daud_0472
OrganismDesulforudis audaxviator (strain MP104C) [Complete proteome] [HAMAP] EMBL ACA59018.1
Taxonomic identifier477974 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Candidatus Desulforudis ›

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACA59018.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1I1U7 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 4F71C3CED303C9BA

FASTA38041,037
        10         20         30         40         50         60 
MFLREYSVWA EVNLSALAHN LGEVRRLVGS DTEVAAVVKA NAYGHGLVEV AGTLLAHGAD 

        70         80         90        100        110        120 
RLCVARVDEG VALREAGIDA PVLVMGFVPP PLYDTALDHD LTLTVYDPEA AAELSAAAAR 

       130        140        150        160        170        180 
HGRPAPVHLK LDTGMGRLGL VTADRDLYRN ILAIASLPHL EIEGLYTHFA NADRRDKSHA 

       190        200        210        220        230        240 
QRQLVDFVEV TCTLGHDGID IELLHAANSA ALIDMPESRL NLVRPGIMLY GLYPSPEVKT 

       250        260        270        280        290        300 
RQVDLRPVMT LKAQVGFLKR VPAGWTVSYG STYTTPAPTT LATVPCGYAD GYNRRLSNRG 

       310        320        330        340        350        360 
AVLIHGRRAP VVGRVTMDQI VVDVGHIPGV AVGDEVVLFG RQGEAELHVD EVAALLDTIN 

       370        380 
YEVVCAVSAR VPRVYVRNET

« Hide

References

[1]"Complete sequence of chromosome of Desulforudis audaxviator MP104C."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D., Pitluck S., Lowry S.R., Larimer F., Land M.L., Hauser L., Kyrpides N., Ivanova N.N., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MP104C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000860 Genomic DNA. Translation: ACA59018.1.
RefSeqYP_001716650.1. NC_010424.1.

3D structure databases

ProteinModelPortalB1I1U7.
ModBaseSearch...

Protein-protein interaction databases

STRING477974.Daud_0472.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA59018; ACA59018; Daud_0472.
GeneID6027659.
KEGGdau:Daud_0472.
PATRIC31967699. VBICanDes92303_0498.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAIPRINAG.

Enzyme and pathway databases

BioCycDAUD477974:GH0B-488-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1I1U7_DESAP
AccessionPrimary (citable) accession number: B1I1U7
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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