Reviewed, UniProtKB/Swiss-Prot B1I1S8 (SYGA_DESAP)

Names and origin

Protein names

Recommended name:
    Glycyl-tRNA synthetase alpha subunit
    EC=6.1.1.14
Alternative name(s):
    Glycine--tRNA ligase alpha subunit
      Short name=GlyRS

Gene names

Name:	glyQ
Ordered Locus Names:	Daud_0484

Organism

Desulforudis audaxviator (strain MP104C) [Complete proteome] [HAMAP]

Taxonomic identifier

477974 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Candidatus Desulforudis

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254
Subunit structure	Tetramer of two alpha and two beta subunits By similarity.
Subcellular location	Cytoplasm By similarity.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm
Ligand	ATP-binding Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP glycine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 295	295	Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254		PRO_1000101183

Sequences

	Sequence		Length	Mass (Da)
	B1I1S8-1 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 8A90CA95E8E996B4	FASTA	295	33,853
	10 20 30 40 50 60 MDFQELIMTL DRFWGDRGCI IQQPYDVEKG AGTMNPATFL RVLGPEPWNV AYVEPSRRPT 70 80 90 100 110 120 DGRYGENPNR LQHYYQYQVI LKPSPDDVIE VYLDSLRAIG INPLEHDIRL VEDNWESPTL 130 140 150 160 170 180 GAWGLGWEVW LDGMEITQFT YFQQCGGFDL KPVSAEITYG LERLALYLQG RDSVFDITWT 190 200 210 220 230 240 GDITYRDVHF QGEVEHSRYN FEIADVELLH DLFEGYEREA QAVLEQQLVL PAYDYVLKCS 250 260 270 280 290 HVFNLLDARG AISVTERTGY IARVRALARD CAKAYVAQRE RLGFPLLKGG APDGR

References

[1]

"Complete sequence of chromosome of Desulforudis audaxviator MP104C." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D., Pitluck S., Lowry S.R., Larimer F., Land M.L., Hauser L., Kyrpides N., Ivanova N.N., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000860 Genomic DNA. Translation: ACA59030.1.
RefSeq	YP_001716662.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	6026331.
GenomeReviews	Gene locus Daud_0484 in contig CP000860_GR.
KEGG	dau:Daud_0484.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	CRRPTDG.
Family and domain databases
HAMAP	MF_00254. [Tree]
InterPro	IPR006194. Gly-tRNA-synth_II_heterodimer. IPR002310. Gly-tRNA_synth_IIc_asu. [Graphical view]
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
ProDom	PD006985. tRNA_synt_2e. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00388. glyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SYGA_DESAP

Accession

Primary (citable) accession number: B1I1S8

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	April 29, 2008
Last modified:	November 3, 2009
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)