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B1HMK3 (B1HMK3_LYSSC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase 2 HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase 2 HAMAP MF_00123
Gene names
Name:argS2 HAMAP MF_00123
Ordered Locus Names:Bsph_2836
OrganismLysinibacillus sphaericus (strain C3-41) [Complete proteome] [HAMAP] EMBL ACA40369.1
Taxonomic identifier444177 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Lysinibacillus

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123

Ontologies

Keywords
   Biological processProtein biosynthesis HAMAP MF_00123
   Cellular componentCytoplasm HAMAP MF_00123
   LigandATP-binding HAMAP MF_00123
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase HAMAP MF_00123 EMBL ACA40369.1
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif119 – 12911"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
B1HMK3 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: A77E8476F5A469E3

FASTA55762,809
        10         20         30         40         50         60 
MNQQIAKSIA EILNHQLTAQ DVEQLLEKPK SLERGDMAFP CFTLAKIWKK PPQQIAIDIA 

        70         80         90        100        110        120 
SQLQNEIIHQ VQSVGGYVNI FLHQVKVTQQ VLGLIMQEQQ NYGTNQAERG SVVLDFSSPN 

       130        140        150        160        170        180 
IAKPFSMGHL RSTVIGNALA NIAVKNGYQA IRINHLGDWG TQFGKLIVAY QNWGDKEAIT 

       190        200        210        220        230        240 
ASPIEELLKI YVKFHTMAEQ DPILNEMARA AFKALEDGDS EALALWQWFR DVSLDEFQTI 

       250        260        270        280        290        300 
YQLLGIKFDE FTGEAFYNDK MTKVVTELQN KGLLMESEGA FVVEMEEMPP CLITKTDGAT 

       310        320        330        340        350        360 
LYATRDLAAA FYRQQQYQPN KIFYVVGNEQ TLHFKQLFQV IEKMGYGWAK DLQHVPFGMM 

       370        380        390        400        410        420 
LKDGKKMSTR KGKVVLLADV LAEAIATAKR NIEDKNPHLQ QKERVAQQVG VGAVIFNDLK 

       430        440        450        460        470        480 
YHRLNDIEFS IEQMMNFEGE TGPYVQYSYA RICSILAKGN VPSQLKSYAP LGQQAWSIIL 

       490        500        510        520        530        540 
LLEQFPQVVD ASFNQADPSL IAKYALQLAR LFNKYYAHQK ILADDAQQAS RLALCHCVAI 

       550 
VLKESLALLG IESPENM

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References

[1]"Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species."
Hu X., Fan W., Han B., Liu H., Zheng D., Li Q., Dong W., Yan J., Gao M., Berry C., Yuan Z.
J. Bacteriol. 190:2892-2902(2008) [PubMed: 18296527] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000817 Genomic DNA. Translation: ACA40369.1.
RefSeqYP_001698499.1. NC_010382.1.

3D structure databases

ProteinModelPortalB1HMK3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1HMK3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6021054.
GenomeReviewsGene locus Bsph_2836 in contig CP000817_GR.
KEGGlsp:Bsph_2836.
PATRIC22418133. VBILysSph89750_2926.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695395.
OMAFHEEAEK.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. ArgS. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1HMK3_LYSSC
AccessionPrimary (citable) accession number: B1HMK3
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info