Skip Header

Contribute Send feedback
Read comments (?) or add your own

B1H504 (B1H504_BURPS) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase 1 HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:alr EMBL EDS82239.1
Synonyms:alr1 HAMAP MF_01201
ORF Names:BURPSS13_T0097 EMBL EDS82239.1
OrganismBurkholderia pseudomallei S13 EMBL EDS82239.1
Taxonomic identifier320374 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2521Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B1H504 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 8BD3BE62169C70F3

FASTA37440,060
        10         20         30         40         50         60 
MPRPIVARIH PDAVAHNLAI VRQKAPNARI WSVVKANAYG HGIEHVYPAL AGADGIALLD 

        70         80         90        100        110        120 
LDEAVRVREL GWTKPVLLLE GIFEAADVEI ADRHRLTVAV HGDEQLKLLT AAKTTRPIDI 

       130        140        150        160        170        180 
QLKMNSGMNR LGYRPHALRA AWERAAAAPS IGRIALMMHF ANADEGEIDW QMSVFDAATQ 

       190        200        210        220        230        240 
GLPGERTLSN SAAVLWHPRA HRDWVRPGTI LYGASPTGAS RHVADVPLRA AMTVTSRIIG 

       250        260        270        280        290        300 
VQTLTPGETV GYGRCFAAER EMRIGVVACG YADGYPRHAP TGTPIAVDGV RTQVVGRVSM 

       310        320        330        340        350        360 
DMLTVDLTPC PNAGVGSAVE LWGEQVRVDD VAEAAGTIGY ELMCALARRV PVTVDPSPAA 

       370 
AALAQPVRTG SYGR

« Hide

References

[1]"Annotation of Burkholderia pseudomallei S13."
DeShazer D., Woods D.E., Nierman W.C.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S13 EMBL EDS82239.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CH899760 Genomic DNA. Translation: EDS82239.1.

3D structure databases

ProteinModelPortalB1H504.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC30412568. VBIBurPse99458_0445.

Phylogenomic databases

OMASVELWGD.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1H504_BURPS
AccessionPrimary (citable) accession number: B1H504
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info