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B1H2Y8 (B1H2Y8_XENTR) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gad1.2 Xenbase XB-GENE-5830282
Synonyms:LOC100145511 EMBL AAI61181.1
OrganismXenopus tropicalis (Western clawed frog) (Silurana tropicalis) EMBL AAI61181.1
Taxonomic identifier8364 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
B1H2Y8 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 3945B3426A7D4656

FASTA54261,821
        10         20         30         40         50         60 
MEKVGTCADE GNSQPKLLHE KHICQEKANE ERIMHSEKYI SDFSNIYSTD LLPTRNGEKC 

        70         80         90        100        110        120 
TEQFLIEVLR ILLNHIKKTY DGESKVLDFH HPHQLLEGLE GFNLELSDQP EPLEQILVDC 

       130        140        150        160        170        180 
SDTLKYSIKT GHPRYFNQLS CGLDIIGLAG EWLTATANTN MFTYEIAPVF IIMEEIVLKK 

       190        200        210        220        230        240 
MQEIIGWGEN EADGIFSPGG TISNLYSLQA ARYKYFPMVK TKGMAALPQI VIFTSEQSHY 

       250        260        270        280        290        300 
SFKKASAILG IGTDNVIAIK CDERGKMIPS DLEDKILKAK RQGQHPFYVS ATAGTTVYGA 

       310        320        330        340        350        360 
FDPLITIADI CKRYGLWMHV DAAWGGGLLL SKKHRYKMNG IERANSVTWN PHKIMGVPLQ 

       370        380        390        400        410        420 
CSAILIRQKG LLQACNQQCA DYLFQMDKPY DTAYDTGDKT IQCGRHVDIF KLWLMWKAKG 

       430        440        450        460        470        480 
SCGFELQINR CLELSEYLYN KLQSKSNFEL VFRDKPEYTN VCFWYIPPSL EHVPRDKEWK 

       490        500        510        520        530        540 
ARLHKIAPQI KARMMEEGTV MVSYQPQGDK PNFFRMVFSN PASKKSDVDF LLEEIERLGK 


GL 

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References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: N6 EMBL AAI61181.1.
Tissue: Oviduct EMBL AAI61181.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC161181 mRNA. Translation: AAI61181.1.
RefSeqNP_001120426.1. NM_001126954.1.
UniGeneStr.6300.

3D structure databases

ProteinModelPortalB1H2Y8.
SMRB1H2Y8. Positions 41-540.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING8364.ENSXETP00000012900.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100145511.
KEGGxtr:100145511.

Organism-specific databases

CTD100137647.
XenbaseXB-GENE-5830282. gad1.2.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000005382.
HOVERGENHBG004980.
KOK01580.

Gene expression databases

BgeeB1H2Y8.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1H2Y8_XENTR
AccessionPrimary (citable) accession number: B1H2Y8
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: October 16, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)