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B1H2Y8

- B1H2Y8_XENTR

UniProt

B1H2Y8 - B1H2Y8_XENTR

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Protein
Submitted name:

LOC100145511 protein

Gene

gad1.2

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100145511 proteinImported
Gene namesi
Name:gad1.2Imported
Synonyms:LOC100145511Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-5830282. gad1.2.

Expressioni

Gene expression databases

BgeeiB1H2Y8.
ExpressionAtlasiB1H2Y8. baseline.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000012900.

Structurei

3D structure databases

ProteinModelPortaliB1H2Y8.
SMRiB1H2Y8. Positions 41-540.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000005382.
HOVERGENiHBG004980.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1H2Y8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEKVGTCADE GNSQPKLLHE KHICQEKANE ERIMHSEKYI SDFSNIYSTD
60 70 80 90 100
LLPTRNGEKC TEQFLIEVLR ILLNHIKKTY DGESKVLDFH HPHQLLEGLE
110 120 130 140 150
GFNLELSDQP EPLEQILVDC SDTLKYSIKT GHPRYFNQLS CGLDIIGLAG
160 170 180 190 200
EWLTATANTN MFTYEIAPVF IIMEEIVLKK MQEIIGWGEN EADGIFSPGG
210 220 230 240 250
TISNLYSLQA ARYKYFPMVK TKGMAALPQI VIFTSEQSHY SFKKASAILG
260 270 280 290 300
IGTDNVIAIK CDERGKMIPS DLEDKILKAK RQGQHPFYVS ATAGTTVYGA
310 320 330 340 350
FDPLITIADI CKRYGLWMHV DAAWGGGLLL SKKHRYKMNG IERANSVTWN
360 370 380 390 400
PHKIMGVPLQ CSAILIRQKG LLQACNQQCA DYLFQMDKPY DTAYDTGDKT
410 420 430 440 450
IQCGRHVDIF KLWLMWKAKG SCGFELQINR CLELSEYLYN KLQSKSNFEL
460 470 480 490 500
VFRDKPEYTN VCFWYIPPSL EHVPRDKEWK ARLHKIAPQI KARMMEEGTV
510 520 530 540
MVSYQPQGDK PNFFRMVFSN PASKKSDVDF LLEEIERLGK GL
Length:542
Mass (Da):61,821
Last modified:April 29, 2008 - v1
Checksum:i3945B3426A7D4656
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC161181 mRNA. Translation: AAI61181.1.
RefSeqiNP_001120426.1. NM_001126954.1.
UniGeneiStr.6300.

Genome annotation databases

GeneIDi100145511.
KEGGixtr:100145511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC161181 mRNA. Translation: AAI61181.1 .
RefSeqi NP_001120426.1. NM_001126954.1.
UniGenei Str.6300.

3D structure databases

ProteinModelPortali B1H2Y8.
SMRi B1H2Y8. Positions 41-540.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 8364.ENSXETP00000012900.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100145511.
KEGGi xtr:100145511.

Organism-specific databases

CTDi 100137647.
Xenbasei XB-GENE-5830282. gad1.2.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000005382.
HOVERGENi HBG004980.
KOi K01580.

Gene expression databases

Bgeei B1H2Y8.
ExpressionAtlasi B1H2Y8. baseline.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: N6Imported.
    Tissue: OviductImported.

Entry informationi

Entry nameiB1H2Y8_XENTR
AccessioniPrimary (citable) accession number: B1H2Y8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 26, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)