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Protein

Gamma-tubulin complex component

Gene

tubgcp3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-XTR-380270. Recruitment of mitotic centrosome proteins and complexes.
R-XTR-380320. Recruitment of NuMA to mitotic centrosomes.

Names & Taxonomyi

Protein namesi
Recommended name:
Gamma-tubulin complex componentUniRule annotation
Gene namesi
Name:tubgcp3Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-490983. tubgcp3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, CytoskeletonUniRule annotation, MicrotubuleUniRule annotation

Expressioni

Gene expression databases

BgeeiENSXETG00000001903.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000004033.

Family & Domainsi

Sequence similaritiesi

Belongs to the TUBGCP family.UniRule annotation

Phylogenomic databases

eggNOGiKOG2000. Eukaryota.
ENOG410XQ5B. LUCA.
GeneTreeiENSGT00850000132278.
HOGENOMiHOG000007959.
HOVERGENiHBG031568.
KOiK16570.
OMAiIWKTMKP.
OrthoDBiEOG091G01V2.
TreeFamiTF300705.

Family and domain databases

InterProiIPR007259. GCP.
[Graphical view]
PANTHERiPTHR19302. PTHR19302. 3 hits.
PfamiPF04130. Spc97_Spc98. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1H2U5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVPDQKSPN VLLQNLCCRI LGKGEADVAQ QFQYAVRVIG SNFAPTVERD
60 70 80 90 100
EFLVAEKIKK EFVRQRREAD GALFSELHRK LQSQGVLKNR WSVLYLLLSL
110 120 130 140 150
SEDPRKQPNK TSSYAALFAQ ALPRDAHSTP YYYARPQSLQ LSYQDRNVQC
160 170 180 190 200
AQNAASMGSS GIGSIGMYAL NGPTPQSIIQ GQSYQTPNMG DALRQQLGSR
210 220 230 240 250
LAWTLAAGQQ PSQQSTTTKG LPNTVSRNVP RTRREGDSSG SVEITETALV
260 270 280 290 300
RDLLYVFQGI DGKFIKMCNS ENCYKVDGKV ALSKSLKDIT SKLAELGWLH
310 320 330 340 350
NKIRKYTDQR SLDRAFGLVG QSFCAALHQE LKEYYRLLSV LHSQLQVEDD
360 370 380 390 400
QGVNLGMESN LTLRRLLVWT YDPKIRLKTL AALVDHCQGR KGGELASAVH
410 420 430 440 450
AYTKTGDPYM RSLVQHILGL VSHPILNFLY RWIYDGELED TYHEFFVASD
460 470 480 490 500
PMVKTDRLWH DKYSLRKSMI PSFMTMDQSR KVLLIGKSIN FLHQVCHDQT
510 520 530 540 550
PATKTMAVGQ SAESPKDAAD LFTDLENAFQ SKIDAAYFDT SKYLLDVLNK
560 570 580 590 600
NYNLLEHMQA MRRYLLLGQG DFIRHLMDLL KPELVRPATT LYQHNLTGIL
610 620 630 640 650
ETAVRATNAQ FDNPEILKRL DVRLLEVSPG DTGWDVFSLD YHVDGPIATV
660 670 680 690 700
FTRECMSHYL RVFNFLWRAK RMEYILTDIW KGHMCNAKLL KSMPELSGVL
710 720 730 740 750
HQCHILASEM VHFIHQMQYY ITFEVLECSW DELWNKVLQA QDLDHIIAAH
760 770 780 790 800
DVFLDTIISR CLLDSESRAL LNQLRAVFDQ IIEFQNAQDA LYRAALEELQ
810 820 830 840 850
LRLQFEERKK ERASEGQWGV TAAEEEEENK RVQEFQESIP KMRSQLRILT
860 870 880 890 900
HFYQGIVEQF LVLLTTSTDE SLRFLSFRLD FNEHYKAREP RLRVSLGTRG

RRSLHV
Length:906
Mass (Da):103,766
Last modified:April 29, 2008 - v1
Checksum:i0C9E0F5B100E956A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01018036 Genomic DNA. No translation available.
AAMC01018037 Genomic DNA. No translation available.
AAMC01018038 Genomic DNA. No translation available.
AAMC01018039 Genomic DNA. No translation available.
BC161134 mRNA. Translation: AAI61134.1.
RefSeqiNP_001116269.1. NM_001122797.1.
UniGeneiStr.67761.

Genome annotation databases

EnsembliENSXETT00000004033; ENSXETP00000004033; ENSXETG00000001903.
GeneIDi100101728.
KEGGixtr:100101728.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01018036 Genomic DNA. No translation available.
AAMC01018037 Genomic DNA. No translation available.
AAMC01018038 Genomic DNA. No translation available.
AAMC01018039 Genomic DNA. No translation available.
BC161134 mRNA. Translation: AAI61134.1.
RefSeqiNP_001116269.1. NM_001122797.1.
UniGeneiStr.67761.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000004033.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000004033; ENSXETP00000004033; ENSXETG00000001903.
GeneIDi100101728.
KEGGixtr:100101728.

Organism-specific databases

CTDi10426.
XenbaseiXB-GENE-490983. tubgcp3.

Phylogenomic databases

eggNOGiKOG2000. Eukaryota.
ENOG410XQ5B. LUCA.
GeneTreeiENSGT00850000132278.
HOGENOMiHOG000007959.
HOVERGENiHBG031568.
KOiK16570.
OMAiIWKTMKP.
OrthoDBiEOG091G01V2.
TreeFamiTF300705.

Enzyme and pathway databases

ReactomeiR-XTR-380270. Recruitment of mitotic centrosome proteins and complexes.
R-XTR-380320. Recruitment of NuMA to mitotic centrosomes.

Gene expression databases

BgeeiENSXETG00000001903.

Family and domain databases

InterProiIPR007259. GCP.
[Graphical view]
PANTHERiPTHR19302. PTHR19302. 3 hits.
PfamiPF04130. Spc97_Spc98. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1H2U5_XENTR
AccessioniPrimary (citable) accession number: B1H2U5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: October 5, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.