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B1H2S4

- B1H2S4_XENTR

UniProt

B1H2S4 - B1H2S4_XENTR

Protein
Submitted name:

LOC100145475 protein

Gene

tgm6

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei277 – 2771UniRule annotation
    Active sitei335 – 3351UniRule annotation
    Active sitei358 – 3581UniRule annotation

    GO - Molecular functioni

    1. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. peptide cross-linking Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LOC100145475 proteinImported
    Gene namesi
    Name:tgm6Imported
    Synonyms:LOC100145475Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

    Organism-specific databases

    XenbaseiXB-GENE-5878274. tgm6.

    Interactioni

    Protein-protein interaction databases

    STRINGi8364.ENSXETP00000016021.

    Structurei

    3D structure databases

    ProteinModelPortaliB1H2S4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG80379.
    HOGENOMiHOG000231695.
    HOVERGENiHBG004342.
    KOiK05620.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1H2S4-1 [UniParc]FASTAAdd to Basket

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    MRSDPQVIAC DWYYAVNEKA HHTDVYESDD LVLRRGQPFK LTLMLNRPLQ    50
    AEENILFIFE TGPSPSETSK TKVVFPLFRA ENLQSWGAIL TSIKSTSITV 100
    TINSHSDAVI GRYILSVAVQ CRGSDKPLPH QIGALNLLFN PWLQGDAVFM 150
    AEEDQRQEYV MNEQGVIFQG SDEDITSINW EYNQFERNIL DICLVILDRS 200
    QNYKKDPALD VSQRNDPLYV CRVLSAMLNS KGDDGVLEEN WSDDYINGAS 250
    PSSWNGSMNI LKSWYYSKFK PVKYGQCWVY AGMLCTVLRS LGIPTRVITH 300
    FNSGQDKNAN LFIDLQYKSQ GSRQNDQEDQ LWNFHVWNEA YFKRRDLGKS 350
    YNGWQVIDST PLKRSDGVYQ CGPAPLTAIK EGDINLNYDV KYMFASVNAD 400
    VACWIYYRNG TKKQVSNNAK ETGKFISTKA IGSNDRVDVT NNYKYAKGSE 450
    KEIKVFEKAL KLSKGSFVGR TREKPRGGNI LFGRCTLDQI ATFGQDFNLI 500
    LSLKNLTPDS INVTVYINTS AILYTGRQRH TIWTGGKFLS LGPNLEKRFS 550
    IPVKYGQYSK HMTDNGVICM TALCEVEGTE ERILVERNVS LVKPPLSITL 600
    PDKAIINQES NANIVIVNPL LETLNSCILW VEGYGLTDKI LKKEVPSLKP 650
    GQSSEHNFVI TPMKTGVRTL LVNFSCDKIQ NMKGSGKILI TYSQEVSDSP 700
    VPT 703
    Length:703
    Mass (Da):79,333
    Last modified:April 29, 2008 - v1
    Checksum:iB921C708630F292C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC161110 mRNA. Translation: AAI61110.1.
    RefSeqiNP_001120399.1. NM_001126927.1.
    UniGeneiStr.61901.

    Genome annotation databases

    GeneIDi100145475.
    KEGGixtr:100145475.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC161110 mRNA. Translation: AAI61110.1 .
    RefSeqi NP_001120399.1. NM_001126927.1.
    UniGenei Str.61901.

    3D structure databases

    ProteinModelPortali B1H2S4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 8364.ENSXETP00000016021.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100145475.
    KEGGi xtr:100145475.

    Organism-specific databases

    CTDi 343641.
    Xenbasei XB-GENE-5878274. tgm6.

    Phylogenomic databases

    eggNOGi NOG80379.
    HOGENOMi HOG000231695.
    HOVERGENi HBG004342.
    KOi K05620.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: TestesImported.

    Entry informationi

    Entry nameiB1H2S4_XENTR
    AccessioniPrimary (citable) accession number: B1H2S4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)