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Protein
Submitted name:

LOC100145410 protein

Gene

LOC100145410

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100145410 proteinImported
Gene namesi
Name:LOC100145410Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG052608.
KOiK12357.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026944. Sialidase-3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF7. PTHR10628:SF7. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

B1H2F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKQLGSKAR HFPVTTVFKQ DPQKSEGTQV TYRIPALIYN GENKTFLAFA
60 70 80 90 100
EKRKTTDDTD ADVLVMRRGI WRDGVVEWDM THECLSSASL PNHRSMNPCP
110 120 130 140 150
VYERESKTLF LFFITVPVGV SEHKQIKENK NQARLCYITS KDTGKTWSAV
160 170 180 190 200
TDLTADVIGE QEKNWATFAV GPGHGIQMKS GRLIIPAYTY YFTSGTSPTS
210 220 230 240 250
HAFAFYSDDK GSTWHIGKCV DGESNECQMA EIIDDDGNSK LYCNARNRSG
260 270 280 290 300
YRNEALSESK GKDFKSSSVR KLTDTGNGCQ GSVLSFAPDH TSEKTWLLYC
310 320 330 340 350
HPADKRKRMS LGVYLNKCPS DLSGWGNPVI LHEGPSGYSD LTQCGDGKHF
360 370
ACLMECGEKS ELERIGFVLF EHKEVI
Length:376
Mass (Da):42,070
Last modified:April 29, 2008 - v1
Checksum:i53A5B8A78FB8B91D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC160978 mRNA. Translation: AAI60978.1.
UniGeneiStr.78587.

Genome annotation databases

KEGGixtr:100145410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC160978 mRNA. Translation: AAI60978.1.
UniGeneiStr.78587.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGixtr:100145410.

Organism-specific databases

CTDi10825.

Phylogenomic databases

HOVERGENiHBG052608.
KOiK12357.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026944. Sialidase-3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF7. PTHR10628:SF7. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: PopAImported.
    Tissue: WholeImported.

Entry informationi

Entry nameiB1H2F2_XENTR
AccessioniPrimary (citable) accession number: B1H2F2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: April 29, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.