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B1H1J6

- B1H1J6_DANRE

UniProt

B1H1J6 - B1H1J6_DANRE

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Protein
Submitted name: Dpys protein
Gene
dpys
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. pyrimidine nucleobase catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Dpys proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:dpysImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-070508-1. dpys.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000103150.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0044.
GeneTreeiENSGT00740000115468.
HOGENOMiHOG000219145.
HOVERGENiHBG000806.
KOiK01464.
OMAiAVDYNIF.
TreeFamiTF314706.

Family and domain databases

Gene3Di2.30.40.10. 2 hits.
InterProiIPR006680. Amidohydro_1.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
PfamiPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51338. SSF51338. 2 hits.
TIGRFAMsiTIGR02033. D-hydantoinase. 1 hit.

Sequencei

Sequence statusi: Complete.

B1H1J6-1 [UniParc]FASTAAdd to Basket

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MTAQSCILIK GGKVVNEDFS VMADVYIEDG VISGVGTDLQ VAAGTRVIDA    50
THKLVLPGGI DSHTHMELSF MGTTTADDFQ TGTQAAVAGG TTMILDFVIA 100
QKGCSLLEAY ERWRRTADPK VCCDYSLHMA VTWWDDTVKK EMETLVSEKG 150
INSFKMFMAY KDLYMLQDLE LYAVFSTCKE IGAIAQVHAE NGDLIAEGAK 200
RMLSLGITGP EGHEMCRPEE VEAEATQRAI TIAHATNCPL YVVHVMSKSA 250
AKVVANARRN GRLVFGEPIA AGLGTDGTHY WHENWAHAAG FVMGPPLRPD 300
PSTPGYLMDL LANDDLSVTG TDNCTFSVCQ KALGKDDFTK IPNGVNGVED 350
RMSVIWEKGV HSGKMDENRF VAVTSTNAAK IFNLYPRKGR IAKGSDADLV 400
IWDPKASRVI SAKTHHQAVD YNIFEGMLCH GVPVVTISRG KVVYENGKLF 450
TKPGEGRYIP RKPFAEFVYK RINQREKVGT PSAVCREPYT GEIISIGLKQ 500
Length:500
Mass (Da):54,684
Last modified:April 29, 2008 - v1
Checksum:iC20D7669283B7A74
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABZ01066303 Genomic DNA. No translation available.
CABZ01066304 Genomic DNA. No translation available.
CU695177 Genomic DNA. No translation available.
BC160631 mRNA. Translation: AAI60631.1.
RefSeqiNP_001116535.1. NM_001123063.1.
UniGeneiDr.41082.

Genome annotation databases

EnsembliENSDART00000114795; ENSDARP00000103150; ENSDARG00000079543.
GeneIDi100144569.
KEGGidre:100144569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABZ01066303 Genomic DNA. No translation available.
CABZ01066304 Genomic DNA. No translation available.
CU695177 Genomic DNA. No translation available.
BC160631 mRNA. Translation: AAI60631.1 .
RefSeqi NP_001116535.1. NM_001123063.1.
UniGenei Dr.41082.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000103150.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000114795 ; ENSDARP00000103150 ; ENSDARG00000079543 .
GeneIDi 100144569.
KEGGi dre:100144569.

Organism-specific databases

CTDi 1807.
ZFINi ZDB-GENE-070508-1. dpys.

Phylogenomic databases

eggNOGi COG0044.
GeneTreei ENSGT00740000115468.
HOGENOMi HOG000219145.
HOVERGENi HBG000806.
KOi K01464.
OMAi AVDYNIF.
TreeFami TF314706.

Miscellaneous databases

NextBioi 20791458.

Family and domain databases

Gene3Di 2.30.40.10. 2 hits.
InterProi IPR006680. Amidohydro_1.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view ]
Pfami PF01979. Amidohydro_1. 1 hit.
[Graphical view ]
SUPFAMi SSF51338. SSF51338. 2 hits.
TIGRFAMsi TIGR02033. D-hydantoinase. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Whole bodyImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  3. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiB1H1J6_DANRE
AccessioniPrimary (citable) accession number: B1H1J6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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