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Protein
Submitted name:

Dpys protein

Gene

dpys

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_303625. Pyrimidine catabolism.

Names & Taxonomyi

Protein namesi
Submitted name:
Dpys proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:dpysImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437 Componenti: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-070508-1. dpys.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000103150.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0044.
GeneTreeiENSGT00760000119241.
HOGENOMiHOG000219145.
HOVERGENiHBG000806.
OMAiQHQDSLW.
TreeFamiTF314706.

Family and domain databases

Gene3Di2.30.40.10. 2 hits.
InterProiIPR006680. Amidohydro_1.
IPR030633. Dihydropyrimidinase.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
PANTHERiPTHR11647:SF50. PTHR11647:SF50. 1 hit.
PfamiPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51338. SSF51338. 2 hits.
TIGRFAMsiTIGR02033. D-hydantoinase. 1 hit.

Sequencei

Sequence statusi: Complete.

B1H1J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAQSCILIK GGKVVNEDFS VMADVYIEDG VISGVGTDLQ VAAGTRVIDA
60 70 80 90 100
THKLVLPGGI DSHTHMELSF MGTTTADDFQ TGTQAAVAGG TTMILDFVIA
110 120 130 140 150
QKGCSLLEAY ERWRRTADPK VCCDYSLHMA VTWWDDTVKK EMETLVSEKG
160 170 180 190 200
INSFKMFMAY KDLYMLQDLE LYAVFSTCKE IGAIAQVHAE NGDLIAEGAK
210 220 230 240 250
RMLSLGITGP EGHEMCRPEE VEAEATQRAI TIAHATNCPL YVVHVMSKSA
260 270 280 290 300
AKVVANARRN GRLVFGEPIA AGLGTDGTHY WHENWAHAAG FVMGPPLRPD
310 320 330 340 350
PSTPGYLMDL LANDDLSVTG TDNCTFSVCQ KALGKDDFTK IPNGVNGVED
360 370 380 390 400
RMSVIWEKGV HSGKMDENRF VAVTSTNAAK IFNLYPRKGR IAKGSDADLV
410 420 430 440 450
IWDPKASRVI SAKTHHQAVD YNIFEGMLCH GVPVVTISRG KVVYENGKLF
460 470 480 490 500
TKPGEGRYIP RKPFAEFVYK RINQREKVGT PSAVCREPYT GEIISIGLKQ
Length:500
Mass (Da):54,684
Last modified:April 29, 2008 - v1
Checksum:iC20D7669283B7A74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABZ01066303 Genomic DNA. No translation available.
CABZ01066304 Genomic DNA. No translation available.
CU695177 Genomic DNA. No translation available.
BC160631 mRNA. Translation: AAI60631.1.
RefSeqiNP_001116535.1. NM_001123063.1.
UniGeneiDr.41082.

Genome annotation databases

EnsembliENSDART00000114795; ENSDARP00000103150; ENSDARG00000079543.
GeneIDi100144569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABZ01066303 Genomic DNA. No translation available.
CABZ01066304 Genomic DNA. No translation available.
CU695177 Genomic DNA. No translation available.
BC160631 mRNA. Translation: AAI60631.1.
RefSeqiNP_001116535.1. NM_001123063.1.
UniGeneiDr.41082.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000103150.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000114795; ENSDARP00000103150; ENSDARG00000079543.
GeneIDi100144569.

Organism-specific databases

CTDi1807.
ZFINiZDB-GENE-070508-1. dpys.

Phylogenomic databases

eggNOGiCOG0044.
GeneTreeiENSGT00760000119241.
HOGENOMiHOG000219145.
HOVERGENiHBG000806.
OMAiQHQDSLW.
TreeFamiTF314706.

Enzyme and pathway databases

ReactomeiREACT_303625. Pyrimidine catabolism.

Miscellaneous databases

NextBioi20791458.
PROiB1H1J6.

Family and domain databases

Gene3Di2.30.40.10. 2 hits.
InterProiIPR006680. Amidohydro_1.
IPR030633. Dihydropyrimidinase.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
PANTHERiPTHR11647:SF50. PTHR11647:SF50. 1 hit.
PfamiPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51338. SSF51338. 2 hits.
TIGRFAMsiTIGR02033. D-hydantoinase. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Whole bodyImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  3. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiB1H1J6_DANRE
AccessioniPrimary (citable) accession number: B1H1J6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: June 24, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.