Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B1H1J6 (B1H1J6_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B1H1J6 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: C20D7669283B7A74

FASTA50054,684
        10         20         30         40         50         60 
MTAQSCILIK GGKVVNEDFS VMADVYIEDG VISGVGTDLQ VAAGTRVIDA THKLVLPGGI 

        70         80         90        100        110        120 
DSHTHMELSF MGTTTADDFQ TGTQAAVAGG TTMILDFVIA QKGCSLLEAY ERWRRTADPK 

       130        140        150        160        170        180 
VCCDYSLHMA VTWWDDTVKK EMETLVSEKG INSFKMFMAY KDLYMLQDLE LYAVFSTCKE 

       190        200        210        220        230        240 
IGAIAQVHAE NGDLIAEGAK RMLSLGITGP EGHEMCRPEE VEAEATQRAI TIAHATNCPL 

       250        260        270        280        290        300 
YVVHVMSKSA AKVVANARRN GRLVFGEPIA AGLGTDGTHY WHENWAHAAG FVMGPPLRPD 

       310        320        330        340        350        360 
PSTPGYLMDL LANDDLSVTG TDNCTFSVCQ KALGKDDFTK IPNGVNGVED RMSVIWEKGV 

       370        380        390        400        410        420 
HSGKMDENRF VAVTSTNAAK IFNLYPRKGR IAKGSDADLV IWDPKASRVI SAKTHHQAVD 

       430        440        450        460        470        480 
YNIFEGMLCH GVPVVTISRG KVVYENGKLF TKPGEGRYIP RKPFAEFVYK RINQREKVGT 

       490        500 
PSAVCREPYT GEIISIGLKQ 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Whole body EMBL AAI60631.1.
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000103150.
[3]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000103150.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CABZ01066303 Genomic DNA. No translation available.
CABZ01066304 Genomic DNA. No translation available.
CU695177 Genomic DNA. No translation available.
BC160631 mRNA. Translation: AAI60631.1.
RefSeqNP_001116535.1. NM_001123063.1.
UniGeneDr.41082.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000103150.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000114795; ENSDARP00000103150; ENSDARG00000079543.
GeneID100144569.
KEGGdre:100144569.

Organism-specific databases

CTD1807.
ZFINZDB-GENE-070508-1. dpys.

Phylogenomic databases

eggNOGCOG0044.
GeneTreeENSGT00740000115468.
HOGENOMHOG000219145.
HOVERGENHBG000806.
KOK01464.
OMAAVDYNIF.
TreeFamTF314706.

Family and domain databases

Gene3D2.30.40.10. 2 hits.
InterProIPR006680. Amidohydro_1.
IPR011778. Hydantoinase/dihydroPyrase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
PfamPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMSSF51338. SSF51338. 2 hits.
TIGRFAMsTIGR02033. D-hydantoinase. 1 hit.
ProtoNetSearch...

Other

NextBio20791458.

Entry information

Entry nameB1H1J6_DANRE
AccessionPrimary (citable) accession number: B1H1J6
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)