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Protein

50S ribosomal protein L32

Gene

rpmF

Organism
Uncultured termite group 1 bacterium phylotype Rs-D17
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

BioCyciUTER471821:GJAD-650-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L32UniRule annotation
Gene namesi
Name:rpmFUniRule annotation
Ordered Locus Names:TGRD_606Imported
OrganismiUncultured termite group 1 bacterium phylotype Rs-D17Imported
Taxonomic identifieri471821 [NCBI]
Taxonomic lineageiBacteriaElusimicrobiaenvironmental samples
ProteomesiUP000001691 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi471821.TGRD_606.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L32P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0333.
HOGENOMiHOG000040268.
KOiK02911.
OMAiKGRGATH.
OrthoDBiEOG6VMTT4.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

B1H0Q7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNPKRKHTP HRRDCRRSAN SKLDAPNLGK CLNCGAAKLS HRVCPECGFY
60 70
NGRLIVPKKA KKSAEDIAEV NR
Length:72
Mass (Da):8,054
Last modified:April 29, 2008 - v1
Checksum:i68F360B0E4E57B99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009510 Genomic DNA. Translation: BAG14089.1.
RefSeqiYP_001956550.1. NC_020419.1.

Genome annotation databases

EnsemblBacteriaiBAG14089; BAG14089; TGRD_606.
GeneIDi6373315.
KEGGirsd:TGRD_606.
PATRICi38571636. VBIUncTer52152_0995.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009510 Genomic DNA. Translation: BAG14089.1.
RefSeqiYP_001956550.1. NC_020419.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi471821.TGRD_606.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAG14089; BAG14089; TGRD_606.
GeneIDi6373315.
KEGGirsd:TGRD_606.
PATRICi38571636. VBIUncTer52152_0995.

Phylogenomic databases

eggNOGiCOG0333.
HOGENOMiHOG000040268.
KOiK02911.
OMAiKGRGATH.
OrthoDBiEOG6VMTT4.

Enzyme and pathway databases

BioCyciUTER471821:GJAD-650-MONOMER.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome of the uncultured termite group 1 bacteria in a single host protist cell."
    Hongoh Y., Sharma V.K., Prakash T., Noda S., Taylor T.D., Kudo T., Sakaki Y., Toyoda A., Hattori M., Ohkuma M.
    Proc. Natl. Acad. Sci. U.S.A. 105:5555-5560(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiB1H0Q7_UNCTG
AccessioniPrimary (citable) accession number: B1H0Q7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: April 29, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.