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B1GYW8 (B1GYW8_UNCTG) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123
Ordered Locus Names:TGRD_728
OrganismUncultured termite group 1 bacterium phylotype Rs-D17 [Complete proteome] [HAMAP]
Taxonomic identifier471821 [NCBI]
Taxonomic lineageBacteria › Elusimicrobia › environmental samples

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif129 – 13911"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
B1GYW8 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 4C19CD577E20E588

FASTA55262,806
        10         20         30         40         50         60 
MIRQKIKDSL KVIIAKYLQG KGITGRLNFT LEIPPRNIDA DFAFNAAMLI AKKVKINPRT 

        70         80         90        100        110        120 
VAQELIDITV KEIPELIEKA EIAGAGFINL RIKNEILYKE LETILREKDK YGSFPENNKE 

       130        140        150        160        170        180 
KILVEFVSAN PTGPLHIGHG RGAAIGDSIV RILKHLGYDV IKEYYLNDYG NQMLVLSKSV 

       190        200        210        220        230        240 
EIRFRQLKGE KIDFPADHYQ GSYIIDIAKR LISENRDIDE VNFKYESVKE ILSWIKDDLK 

       250        260        270        280        290        300 
DFAVEFDDWF SETKITADKD KNGKTEVDKT CEYLLAKGNA YVKGDALWLA STKFGDDKDR 

       310        320        330        340        350        360 
VLKRSDGRYT YLASDAAHHK NKFERGFTKL ANLWGADHHG YVARIKACVQ MLGFDKEALD 

       370        380        390        400        410        420 
IILYQFVSLV RNGLSVTMST RTGEFITLKE VADEVGKDAC RFFFLMRAPD SQIEFDLELA 

       430        440        450        460        470        480 
KKQSSKNPVF YVQYVNARCS SIIRESKNRS GITSEIKNIN FSLLNTKEER DLIKQLAAFC 

       490        500        510        520        530        540 
DTLALSEKTM SPHHFTVYLI ELADIFHKFY ENYRVLTGDA NLTSARLKLI EGVAIIIKNG 

       550 
LNLLGVSVPD KM

« Hide

References

[1]"Complete genome of the uncultured termite group 1 bacteria in a single host protist cell."
Hongoh Y., Sharma V.K., Prakash T., Noda S., Taylor T.D., Kudo T., Sakaki Y., Toyoda A., Hattori M., Ohkuma M.
Proc. Natl. Acad. Sci. U.S.A. 105:5555-5560(2008) [PubMed: 18391199] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009510 Genomic DNA. Translation: BAG14211.1.
RefSeqYP_001956672.1. NS_000191.1.

3D structure databases

ProteinModelPortalB1GYW8.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1GYW8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6373125.
GenomeReviewsGene locus TGRD_728 in contig AP009510_GR.
KEGGrsd:TGRD_728.
PATRIC38572142. VBIUncTer52152_1246.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695395.
OMARMKAAMK.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. ArgS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1GYW8_UNCTG
AccessionPrimary (citable) accession number: B1GYW8
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info