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B1AVK5 (B1AVK5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1691 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000098765

Sequences

Sequence LengthMass (Da)Tools
B1AVK5 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: BFBC8A730041D37A

FASTA1,691164,034
        10         20         30         40         50         60 
MHPGLWLFLV SLCLTKELAE SGQKMSYGKP CGSRDCHGVC TCFPEKGARG HPGPIGTQGP 

        70         80         90        100        110        120 
AGPEGFTGPT GLSGLKGERG SPGPLGPYGS KGDKGPIGVP GFVGISGIPG HPGQPGPRGP 

       130        140        150        160        170        180 
PGPDGCNGTQ GAVGFPGPDG YPGILGPPGL PGHKGAKGEP VPFQGSITGI RGDPGLPGLD 

       190        200        210        220        230        240 
GIPGPSGSSG SPGDAGPIGP PGLQGPPGLP GLPGPEGNMG LGFQGEKGVK GDVGLPGPAG 

       250        260        270        280        290        300 
PPPSTGELEF MGFPKGKKGS KGEPGPPGFP GMSGPPGVPE FGSTGEKGEK GILGLPGPRG 

       310        320        330        340        350        360 
PMGSEGIQGH PGRQGKKGTS GFPGINGFPG IKGEKGDIGV RGPDSFTDAD GAVISGYPGD 

       370        380        390        400        410        420 
PGVLGLPGLR GDEGVQGQRG PSGTPGLPSL TGLPGALGPQ GFPGLKGDQG NSGRTTFGEA 

       430        440        450        460        470        480 
GLPGRVGLPG LPGLPGPSGP PGRTFETGHL SNIEPGFPGL QGEQGPKGHQ GLKGVKGDSG 

       490        500        510        520        530        540 
FCACEGGAPN IGPHGEPGLP GIQGPIGLQG FKGTKGDPGS RGASGPAGTP GLFGPRGQTG 

       550        560        570        580        590        600 
LKGKKGEPTV SRGSKMSGDK GDPGPQGTPG LAGTPGKDGR PGLPGLPGIQ GDGGSGFPGE 

       610        620        630        640        650        660 
RGLPGLPGEK GHDGPIGPPG IGLPGPPGPR GLPGDKGVDG LPGQQGLRGA QGVTLPCIIP 

       670        680        690        700        710        720 
GSYGPSGFPG APGFPGSKGA RGLPGIPGKP GTHGSKGGPG SPGLMHLPGL PGFPGVRGEK 

       730        740        750        760        770        780 
GLPGFPGLPG KDGYPGKAGS PGLPGFKGAA GDIFGAENGA SGEQGLQGLP GDKGFPGDSG 

       790        800        810        820        830        840 
LPGPKGLNGK PGMLGPKGER GNPGTSGPPG QPGPSGSTDP FGIKGTSGFP GAPGLPGISG 

       850        860        870        880        890        900 
HPGKKGQRGD IGQPGSTGKR GLPGIKGLPG PQGSPGFLGS PGLSGVTGLP GIEGQKGEKG 

       910        920        930        940        950        960 
SSGPVGFPGL PGLPGLPGAD GLKGFSGSFG KVGQPGQTGT SGEKGDRGDP GPVGISSPRP 

       970        980        990       1000       1010       1020 
PMLNLWFKGE KGSRGSAGSD GFPGPRGDKG EPGIPGLPGP PGATGQTNTI KGLNGRPGSP 

      1030       1040       1050       1060       1070       1080 
GSMGRRGLPG LKGSLGIAGF PGMPGKSGSQ GLTGTSGLLG ATGIPGLKGD QGQTLGISGS 

      1090       1100       1110       1120       1130       1140 
PGPKGQPGEL GFKGVKGKDG LVGDRGYPGN KGDGGKVGIT GDPGFPGSPG LQGISGMNGD 

      1150       1160       1170       1180       1190       1200 
PGLPGSSGHL GSIGRPGPSG LIGPKGFPGA PGLHGLNGLP GTKGTHGTPG ASITGVPGPA 

      1210       1220       1230       1240       1250       1260 
GLPGPKGERG VPGIVIGDPG KQGSKGQKGD QGSPGLQGPA GTPGAPGISL PSVIAGQPGD 

      1270       1280       1290       1300       1310       1320 
PGRPGLDGER GRPGPPGPPG PPGPSSDQGD PGDSGFPGIP GLQGFKGNQG LPGFSGLSGE 

      1330       1340       1350       1360       1370       1380 
LGLKGMRGEP GLMGTPGKIG QPGDPGFPGM KGKAGPRGFS GPQGAPGHTP IAEAMQVPPG 

      1390       1400       1410       1420       1430       1440 
PLGLPGIDGI PGLIGDPGSQ GSVGLQGSKG LPGIPGKDGP SGLPGPSGIL GDPGLPGLQG 

      1450       1460       1470       1480       1490       1500 
PPGFEGAPGN QGPIGQPGMP GHGVRVGYTL VKHSQSEQVP LCPTGMSRLW VGYSLLFVEG 

      1510       1520       1530       1540       1550       1560 
QEKAHNQDLG FAGSCLPRFS TMPFIYCNIN EVCHYARRND KSYWLSTTAP IPMMPVGQTQ 

      1570       1580       1590       1600       1610       1620 
IPQYISRCSV CEAPSQAIAV HSQDIIVPQC PLGWHSLWIG YSFLMHTAAG AEGGGQSLVS 

      1630       1640       1650       1660       1670       1680 
PGSCLEDFRA TPFIECSGAR GTCHYFANKY SFWLTTVEER GQFREEPVSE TLKTGQLHTR 

      1690 
VSRCQVCMKT P 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL691493 Genomic DNA. No translation available.
AL713983 Genomic DNA. No translation available.
BX640471 Genomic DNA. No translation available.
RefSeqNP_444415.2. NM_053185.2.
UniGeneMm.155586.

3D structure databases

ProteinModelPortalB1AVK5.
SMRB1AVK5. Positions 1467-1689.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbB1AVK5.
PRIDEB1AVK5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000101205; ENSMUSP00000098765; ENSMUSG00000031273.
GeneID94216.
KEGGmmu:94216.
UCSCuc012hpp.1. mouse.

Organism-specific databases

CTD1288.
MGIMGI:2152695. Col4a6.

Phylogenomic databases

eggNOGNOG12793.
GeneTreeENSGT00730000110538.
HOGENOMHOG000085652.
HOVERGENHBG004933.
InParanoidB1AVK5.
KOK06237.
OMANTRTIRI.
OrthoDBEOG7RZ5P3.
PhylomeDBB1AVK5.
TreeFamTF344135.

Gene expression databases

ArrayExpressB1AVK5.

Family and domain databases

Gene3D2.170.240.10. 1 hit.
InterProIPR016187. C-type_lectin_fold.
IPR008160. Collagen.
IPR001442. Collagen_VI_NC.
[Graphical view]
PfamPF01413. C4. 2 hits.
PF01391. Collagen. 21 hits.
[Graphical view]
SMARTSM00111. C4. 2 hits.
[Graphical view]
SUPFAMSSF56436. SSF56436. 2 hits.
PROSITEPS51403. NC1_IV. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio352187.
PROB1AVK5.
SOURCESearch...

Entry information

Entry nameB1AVK5_MOUSE
AccessionPrimary (citable) accession number: B1AVK5
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)