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B1AVH0

- B1AVH0_MOUSE

UniProt

B1AVH0 - B1AVH0_MOUSE

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Protein
Submitted name:

Matrix metalloproteinase-16

Gene

Mmp16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. metalloendopeptidase activity Source: InterPro
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. bone development Source: MGI
  2. chondrocyte proliferation Source: MGI
  3. collagen catabolic process Source: MGI
  4. craniofacial suture morphogenesis Source: MGI
  5. embryonic cranial skeleton morphogenesis Source: MGI
  6. endochondral ossification Source: MGI
  7. ossification Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Matrix metalloproteinase-16Imported
Gene namesi
Name:Mmp16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:1276107. Mmp16.

Subcellular locationi

GO - Cellular componenti

  1. extracellular matrix Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiB1AVH0. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB1AVH0.
SMRiB1AVH0. Positions 12-174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118870.
HOGENOMiHOG000239471.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
3.40.390.10. 1 hit.
InterProiIPR024079. MetalloPept_cat_dom.
IPR028697. MMP16.
IPR001818. Pept_M10_metallopeptidase.
IPR021190. Pept_M10A.
IPR021158. Pept_M10A_Zn_BS.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
PfamiPF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view]
PRINTSiPR00138. MATRIXIN.
SUPFAMiSSF47090. SSF47090. 1 hit.
PROSITEiPS00546. CYSTEINE_SWITCH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B1AVH0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAGEVTQALG GAQKIVWLQK YGYLPPTDPR MSVLRSAETM QSALAAMQQF
60 70 80 90 100
YGINMTGKVD RNTIDWMKKP RCGVPDQTRG SSKFNIRRKR YALTGQKWQH
110 120 130 140 150
KHITYSIKNV TPKVGDPETR RAIRRAFDVW QNVTPLTFEE VPYSELENGK
160 170
RDVDITIIFA SGFHGDSSPF DGEG
Length:174
Mass (Da):19,713
Last modified:April 8, 2008 - v1
Checksum:i2465173B6E68C5E2
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei174 – 1741Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL683877 Genomic DNA. No translation available.
AL805957 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000149353; ENSMUSP00000116930; ENSMUSG00000028226.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL683877 Genomic DNA. No translation available.
AL805957 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali B1AVH0.
SMRi B1AVH0. Positions 12-174.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000149353 ; ENSMUSP00000116930 ; ENSMUSG00000028226 .

Organism-specific databases

MGIi MGI:1276107. Mmp16.

Phylogenomic databases

GeneTreei ENSGT00760000118870.
HOGENOMi HOG000239471.

Miscellaneous databases

ChiTaRSi MMP16. mouse.
NextBioi 35546084.
SOURCEi Search...

Gene expression databases

ExpressionAtlasi B1AVH0. baseline and differential.

Family and domain databases

Gene3Di 1.10.101.10. 1 hit.
3.40.390.10. 1 hit.
InterProi IPR024079. MetalloPept_cat_dom.
IPR028697. MMP16.
IPR001818. Pept_M10_metallopeptidase.
IPR021190. Pept_M10A.
IPR021158. Pept_M10A_Zn_BS.
IPR002477. Peptidoglycan-bd-like.
[Graphical view ]
PANTHERi PTHR10201:SF26. PTHR10201:SF26. 1 hit.
Pfami PF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view ]
PRINTSi PR00138. MATRIXIN.
SUPFAMi SSF47090. SSF47090. 1 hit.
PROSITEi PS00546. CYSTEINE_SWITCH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AVH0_MOUSE
AccessioniPrimary (citable) accession number: B1AVH0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 29, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3