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Protein
Submitted name:

Matrix metalloproteinase-16

Gene

Mmp16

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metalloendopeptidase activity Source: InterPro
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. bone development Source: MGI
  2. chondrocyte proliferation Source: MGI
  3. collagen catabolic process Source: MGI
  4. craniofacial suture morphogenesis Source: MGI
  5. embryonic cranial skeleton morphogenesis Source: MGI
  6. endochondral ossification Source: MGI
  7. ossification Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Matrix metalloproteinase-16Imported
Gene namesi
Name:Mmp16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:1276107. Mmp16.

Subcellular locationi

GO - Cellular componenti

  1. extracellular matrix Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiB1AVG8. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB1AVG8.
SMRiB1AVG8. Positions 41-122.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118870.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
3.40.390.10. 1 hit.
InterProiIPR024079. MetalloPept_cat_dom.
IPR028697. MMP16.
IPR021158. Pept_M10A_Zn_BS.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
PfamiPF01471. PG_binding_1. 1 hit.
[Graphical view]
SUPFAMiSSF47090. SSF47090. 1 hit.
PROSITEiPS00546. CYSTEINE_SWITCH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B1AVG8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MILLAFSSGR RLDFVHRSGV FFLQTLLWIL CATVCGTEQY FNVEVWLQKY
60 70 80 90 100
GYLPPTDPRM SVLRSAETMQ SALAAMQQFY GINMTGKVDR NTIDWMKKPR
110 120
CGVPDQTRGS SKFNIRRKRY ALTGQKW
Length:127
Mass (Da):14,722
Last modified:April 8, 2008 - v1
Checksum:i9C8D1A90358846E3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei127 – 1271Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL683877 Genomic DNA. No translation available.
AL805957 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000142434; ENSMUSP00000121087; ENSMUSG00000028226.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL683877 Genomic DNA. No translation available.
AL805957 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliB1AVG8.
SMRiB1AVG8. Positions 41-122.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000142434; ENSMUSP00000121087; ENSMUSG00000028226.

Organism-specific databases

MGIiMGI:1276107. Mmp16.

Phylogenomic databases

GeneTreeiENSGT00760000118870.

Miscellaneous databases

ChiTaRSiMmp16. mouse.
NextBioi35546083.
SOURCEiSearch...

Gene expression databases

ExpressionAtlasiB1AVG8. baseline and differential.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
3.40.390.10. 1 hit.
InterProiIPR024079. MetalloPept_cat_dom.
IPR028697. MMP16.
IPR021158. Pept_M10A_Zn_BS.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
PfamiPF01471. PG_binding_1. 1 hit.
[Graphical view]
SUPFAMiSSF47090. SSF47090. 1 hit.
PROSITEiPS00546. CYSTEINE_SWITCH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AVG8_MOUSE
AccessioniPrimary (citable) accession number: B1AVG8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 7, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.