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B1AVG8

- B1AVG8_MOUSE

UniProt

B1AVG8 - B1AVG8_MOUSE

Protein
Submitted name:

Matrix metalloproteinase-16

Gene

Mmp16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. metalloendopeptidase activity Source: InterPro
    2. zinc ion binding Source: InterPro

    GO - Biological processi

    1. bone development Source: MGI
    2. chondrocyte proliferation Source: MGI
    3. collagen catabolic process Source: MGI
    4. craniofacial suture morphogenesis Source: MGI
    5. embryonic cranial skeleton morphogenesis Source: MGI
    6. endochondral ossification Source: MGI
    7. ossification Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Matrix metalloproteinase-16Imported
    Gene namesi
    Name:Mmp16Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 4

    Organism-specific databases

    MGIiMGI:1276107. Mmp16.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular matrix Source: InterPro

    Expressioni

    Gene expression databases

    ArrayExpressiB1AVG8.

    Structurei

    3D structure databases

    ProteinModelPortaliB1AVG8.
    SMRiB1AVG8. Positions 41-122.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00750000117332.
    InParanoidiB1AVG8.

    Family and domain databases

    Gene3Di1.10.101.10. 1 hit.
    3.40.390.10. 1 hit.
    InterProiIPR024079. MetalloPept_cat_dom.
    IPR028697. MMP16.
    IPR021158. Pept_M10A_Zn_BS.
    IPR002477. Peptidoglycan-bd-like.
    [Graphical view]
    PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
    PfamiPF01471. PG_binding_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47090. SSF47090. 1 hit.
    PROSITEiPS00546. CYSTEINE_SWITCH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    B1AVG8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MILLAFSSGR RLDFVHRSGV FFLQTLLWIL CATVCGTEQY FNVEVWLQKY    50
    GYLPPTDPRM SVLRSAETMQ SALAAMQQFY GINMTGKVDR NTIDWMKKPR 100
    CGVPDQTRGS SKFNIRRKRY ALTGQKW 127
    Length:127
    Mass (Da):14,722
    Last modified:April 8, 2008 - v1
    Checksum:i9C8D1A90358846E3
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei127 – 1271Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL683877 Genomic DNA. No translation available.
    AL805957 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000142434; ENSMUSP00000121087; ENSMUSG00000028226.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL683877 Genomic DNA. No translation available.
    AL805957 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali B1AVG8.
    SMRi B1AVG8. Positions 41-122.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000142434 ; ENSMUSP00000121087 ; ENSMUSG00000028226 .

    Organism-specific databases

    MGIi MGI:1276107. Mmp16.

    Phylogenomic databases

    GeneTreei ENSGT00750000117332.
    InParanoidi B1AVG8.

    Miscellaneous databases

    ChiTaRSi MMP16. mouse.
    NextBioi 35546083.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi B1AVG8.

    Family and domain databases

    Gene3Di 1.10.101.10. 1 hit.
    3.40.390.10. 1 hit.
    InterProi IPR024079. MetalloPept_cat_dom.
    IPR028697. MMP16.
    IPR021158. Pept_M10A_Zn_BS.
    IPR002477. Peptidoglycan-bd-like.
    [Graphical view ]
    PANTHERi PTHR10201:SF26. PTHR10201:SF26. 1 hit.
    Pfami PF01471. PG_binding_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47090. SSF47090. 1 hit.
    PROSITEi PS00546. CYSTEINE_SWITCH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB1AVG8_MOUSE
    AccessioniPrimary (citable) accession number: B1AVG8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3