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B1AVA6 (B1AVA6_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cacna1f Ensembl ENSMUSP00000115012 MGI 1859639
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000115012
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length247 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003808.

Sequence similarities

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification] RuleBase RU003808

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000115012

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2471 Ensembl ENSMUSP00000115012

Sequences

Sequence LengthMass (Da)Tools
B1AVA6 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 53C23EBD9D10EC85

FASTA24728,076
        10         20         30         40         50         60 
MSSEDSSRIS ITFFRLFRVM RLVKLLSKGE GIRTLLWTFI KSFQALPYVA LLIAMIFFIY 

        70         80         90        100        110        120 
AVIGMQMFGK VALQDGTQIN RNNNFQTFPQ AVLLLFRCAT GEAWQEIMLA SLPGNRCDPE 

       130        140        150        160        170        180 
SDFGPGEEFT CGSSFAIVYF ISFFMLCAFL IINLFVAVIM DNFDYLTRDW SILGPHHLDE 

       190        200        210        220        230        240 
FKRIWSEYDP GAKGRIKHLD VVALLRRIQP PLGFGKLCPH RVACKRLVAM NVPLNSDGTV 


TFNATLF 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL672231 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalB1AVA6.
SMRB1AVA6. Positions 9-247.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000156047; ENSMUSP00000115012; ENSMUSG00000031142.

Organism-specific databases

MGIMGI:1859639. Cacna1f.

Phylogenomic databases

GeneTreeENSGT00750000117620.
InParanoidB1AVA6.

Family and domain databases

InterProIPR005821. Ion_trans_dom.
IPR002077. VDCCAlpha1.
[Graphical view]
PfamPF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSPR00167. CACHANNEL.
ProtoNetSearch...

Other

NextBio35546071.
SOURCESearch...

Entry information

Entry nameB1AVA6_MOUSE
AccessionPrimary (citable) accession number: B1AVA6
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)