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B1AVA6

- B1AVA6_MOUSE

UniProt

B1AVA6 - B1AVA6_MOUSE

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Protein
Submitted name:

Voltage-dependent L-type calcium channel subunit alpha-1F

Gene
Cacna1f
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. high voltage-gated calcium channel activity Source: RefGenome
  2. voltage-gated calcium channel activity Source: MGI

GO - Biological processi

  1. axonogenesis Source: MGI
  2. calcium ion import Source: RefGenome
  3. cellular calcium ion homeostasis Source: MGI
  4. dendrite morphogenesis Source: MGI
  5. membrane depolarization during action potential Source: RefGenome
  6. retina development in camera-type eye Source: MGI
  7. visual perception Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Calcium channelUniRule annotation, Ion channel, Voltage-gated channelUniRule annotation

Keywords - Biological processi

Calcium transport, Ion transport, Transport

Keywords - Ligandi

Calcium

Names & Taxonomyi

Protein namesi
Submitted name:
Voltage-dependent L-type calcium channel subunit alpha-1FImported
Gene namesi
Name:Cacna1fImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:1859639. Cacna1f.

Subcellular locationi

Membrane; Multi-pass membrane protein By similarity UniRule annotation

GO - Cellular componenti

  1. plasma membrane Source: RefGenome
  2. voltage-gated calcium channel complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliB1AVA6.
SMRiB1AVA6. Positions 9-247.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

TransmembraneUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00750000117620.
InParanoidiB1AVA6.

Family and domain databases

InterProiIPR005821. Ion_trans_dom.
IPR002077. VDCCAlpha1.
[Graphical view]
PfamiPF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00167. CACHANNEL.

Sequencei

Sequence statusi: Fragment.

B1AVA6-1 [UniParc]FASTAAdd to Basket

« Hide

MSSEDSSRIS ITFFRLFRVM RLVKLLSKGE GIRTLLWTFI KSFQALPYVA    50
LLIAMIFFIY AVIGMQMFGK VALQDGTQIN RNNNFQTFPQ AVLLLFRCAT 100
GEAWQEIMLA SLPGNRCDPE SDFGPGEEFT CGSSFAIVYF ISFFMLCAFL 150
IINLFVAVIM DNFDYLTRDW SILGPHHLDE FKRIWSEYDP GAKGRIKHLD 200
VVALLRRIQP PLGFGKLCPH RVACKRLVAM NVPLNSDGTV TFNATLF 247
Length:247
Mass (Da):28,076
Last modified:April 8, 2008 - v1
Checksum:i53C23EBD9D10EC85
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei247 – 2471Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL672231 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000156047; ENSMUSP00000115012; ENSMUSG00000031142.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL672231 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali B1AVA6.
SMRi B1AVA6. Positions 9-247.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000156047 ; ENSMUSP00000115012 ; ENSMUSG00000031142 .

Organism-specific databases

MGIi MGI:1859639. Cacna1f.

Phylogenomic databases

GeneTreei ENSGT00750000117620.
InParanoidi B1AVA6.

Miscellaneous databases

NextBioi 35546071.
SOURCEi Search...

Family and domain databases

InterProi IPR005821. Ion_trans_dom.
IPR002077. VDCCAlpha1.
[Graphical view ]
Pfami PF00520. Ion_trans. 1 hit.
[Graphical view ]
PRINTSi PR00167. CACHANNEL.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AVA6_MOUSE
AccessioniPrimary (citable) accession number: B1AVA6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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