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B1AVA5 (B1AVA5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cacna1f Ensembl ENSMUSP00000119207 MGI 1859639
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000119207
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length230 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003808.

Sequence similarities

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification] RuleBase RU003808

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000119207

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2301 Ensembl ENSMUSP00000119207

Sequences

Sequence LengthMass (Da)Tools
B1AVA5 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 6479A1D759582AD7

FASTA23026,147
        10         20         30         40         50         60 
MNGGHLGESS EDSSRISITF FRLFRVMRLV KLLSKGEGIR TLLWTFIKSF QALPYVALLI 

        70         80         90        100        110        120 
AMIFFIYAVI GMQMFGKVAL QDGTQINRNN NFQTFPQAVL LLFRCATGEA WQEIMLASLP 

       130        140        150        160        170        180 
GNRCDPESDF GPGEEFTCGS SFAIVYFISF FMLCAFLIIN LFVAVIMDNF DYLTRDWSIL 

       190        200        210        220        230 
GPHHLDEFKR IWSEYDPGAK GRIKHLDVVA LLRRIQPPLG FGKLCPHRVA 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL672231 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalB1AVA5.
SMRB1AVA5. Positions 17-229.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000128628; ENSMUSP00000119207; ENSMUSG00000031142.

Organism-specific databases

MGIMGI:1859639. Cacna1f.

Phylogenomic databases

GeneTreeENSGT00750000117620.
InParanoidB1AVA5.

Family and domain databases

InterProIPR005821. Ion_trans_dom.
IPR002077. VDCCAlpha1.
[Graphical view]
PfamPF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSPR00167. CACHANNEL.
ProtoNetSearch...

Other

NextBio35546070.
SOURCESearch...

Entry information

Entry nameB1AVA5_MOUSE
AccessionPrimary (citable) accession number: B1AVA5
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)