Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B1AVA5

- B1AVA5_MOUSE

UniProt

B1AVA5 - B1AVA5_MOUSE

Protein
Submitted name:

Voltage-dependent L-type calcium channel subunit alpha-1F

Gene

Cacna1f

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 2 (14 May 2014)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. high voltage-gated calcium channel activity Source: RefGenome
    2. voltage-gated calcium channel activity Source: MGI

    GO - Biological processi

    1. axonogenesis Source: MGI
    2. calcium ion import Source: RefGenome
    3. cellular calcium ion homeostasis Source: MGI
    4. dendrite morphogenesis Source: MGI
    5. membrane depolarization during action potential Source: RefGenome
    6. retina development in camera-type eye Source: MGI
    7. visual perception Source: MGI

    Keywords - Molecular functioni

    Calcium channelUniRule annotation, Ion channel, Voltage-gated channelUniRule annotation

    Keywords - Biological processi

    Calcium transport, Ion transport, Transport

    Keywords - Ligandi

    Calcium

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Voltage-dependent L-type calcium channel subunit alpha-1FImported
    Gene namesi
    Name:Cacna1fImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome X

    Organism-specific databases

    MGIiMGI:1859639. Cacna1f.

    Subcellular locationi

    Membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: RefGenome
    2. voltage-gated calcium channel complex Source: InterPro

    Keywords - Cellular componenti

    Membrane

    Structurei

    3D structure databases

    ProteinModelPortaliB1AVA5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification]UniRule annotation

    Keywords - Domaini

    TransmembraneUniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00750000117620.
    InParanoidiB1AVA5.

    Family and domain databases

    InterProiIPR005821. Ion_trans_dom.
    IPR002077. VDCCAlpha1.
    [Graphical view]
    PfamiPF00520. Ion_trans. 1 hit.
    [Graphical view]
    PRINTSiPR00167. CACHANNEL.

    Sequencei

    Sequence statusi: Fragment.

    B1AVA5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNGGHLGESS EDSSRISITF FRLFRVMRLV KLLSKGEGIR TLLWTFIKSF    50
    QALPYVALLI AMIFFIYAVI GMQMFGKVAL QDGTQINRNN NFQTFPQAVL 100
    LLFRCATGEA WQEIMLASLP GNRCDPESDF GPGEEFTCGS SFAIVYFISF 150
    FMLCAFLIIN LFVAVIMDNF DYLTRDWSIL GPHHLDEFKR IWSEYDPGAK 200
    GRIKHLDVVA LLRRIQPPLG FGKLCPHRV 229
    Length:229
    Mass (Da):26,076
    Last modified:May 14, 2014 - v2
    Checksum:i59A1D759582AD70F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei229 – 2291Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL672231 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000128628; ENSMUSP00000119207; ENSMUSG00000031142.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL672231 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali B1AVA5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000128628 ; ENSMUSP00000119207 ; ENSMUSG00000031142 .

    Organism-specific databases

    MGIi MGI:1859639. Cacna1f.

    Phylogenomic databases

    GeneTreei ENSGT00750000117620.
    InParanoidi B1AVA5.

    Miscellaneous databases

    NextBioi 35546070.
    SOURCEi Search...

    Family and domain databases

    InterProi IPR005821. Ion_trans_dom.
    IPR002077. VDCCAlpha1.
    [Graphical view ]
    Pfami PF00520. Ion_trans. 1 hit.
    [Graphical view ]
    PRINTSi PR00167. CACHANNEL.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB1AVA5_MOUSE
    AccessioniPrimary (citable) accession number: B1AVA5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: May 14, 2014
    Last modified: October 1, 2014
    This is version 49 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3