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B1AVA4 (B1AVA4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cacna1f Ensembl ENSMUSP00000111390 MGI 1859639
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000111390
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length1977 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003808.

Sequence similarities

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification] RuleBase RU003808

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000111390

Sequences

Sequence LengthMass (Da)Tools
B1AVA4 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 238FCEA61C83C9E9

FASTA1,977221,163
        10         20         30         40         50         60 
MSESEVGKDT TPEPSPANGT GPGPEWGLCP GPPTVGTDTS GASGLGTPRR RTQHNKHKTV 

        70         80         90        100        110        120 
AVASAQRSPR ALFCLTLTNP IRRSCISIVE WKPFDILILL TIFANCVALG VYIPFPEDDS 

       130        140        150        160        170        180 
NTANHNLEQV EYVFLVIFTV ETVLKIVAYG LVLHPSAYIR NGWNLLDFII VVVGLFSVLL 

       190        200        210        220        230        240 
EQGPGRPGDA PHTGGKPGGF DVKALRAFRV LRPLRLVSGV PSLHIVLNSI MKALVPLLHI 

       250        260        270        280        290        300 
ALLVLFVIII YAIIGLELFL GRMHKTCYFL GSDMEAEEDP SPCASSGSGR SCTLNHTECR 

       310        320        330        340        350        360 
GRWPGPNGGI TNFDNFFFAM LTVFQCITME GWTDVLYWMQ DAMGYELPWV YFVSLVIFGS 

       370        380        390        400        410        420 
FFVLNLVLGV LSGEFSKERE KAKARGDFQK LREKQQMEED LRGYLDWITQ AEELDLHDPS 

       430        440        450        460        470        480 
VDGNLASLAE EGRAGHRPQL SELTNRRRGR LRWFSHSTRS THSTSSHASL PASDTGSMTD 

       490        500        510        520        530        540 
TPGDEDEEEG TMASCTRCLN KIMKTRICRH FRRANRGLRA RCRRAVKSNA CYWAVLLLVF 

       550        560        570        580        590        600 
LNTLTIASEH HGQPLWLTQT QEYANKVLLC LFTVEMLLKL YGLGPSVYVA SFFNRFDCFV 

       610        620        630        640        650        660 
VCGGILETTL VEVGAMQPLG ISVLRCVRLL RIFKVTRHWA SLSNLVASLL NSMKSIASLL 

       670        680        690        700        710        720 
LLLFLFIIIF SLLGMQLFGG KFNFDQTHTK RSTFDTFPQA LLTVFQILTG EDWNVVMYDG 

       730        740        750        760        770        780 
IMAYGGPFFP GMLVCVYFII LFICGNYILL NVFLAIAVDN LASGDAGTAK DKGREKSSEG 

       790        800        810        820        830        840 
NPPKENKVLV PGGENEDAKG ARSEGAAPGM EEEEEEEEEE EEEEEEENGA GHVELLQEVV 

       850        860        870        880        890        900 
PKEKVVPIPE GSAFFCLSQT NPLRKACHTL IHHHIFTSLI LVFIILSSVS LAAEDPIRAH 

       910        920        930        940        950        960 
SFRNHILGYF DYAFTSIFTV EILLKMTVFG AFLHRGSFCR SWFNLLDLLV VSVSLISFGI 

       970        980        990       1000       1010       1020 
HSSAISVVKI LRVLRVLRPL RAINRAKGLK HVVQCVFVAI RTIGNIMIVT TLLQFMFACI 

      1030       1040       1050       1060       1070       1080 
GVQLFKGKFY SCTDEAKHTL KECKGSFLIY PDGDVSRPLV RERLWVNSDF NFDNVLSAMM 

      1090       1100       1110       1120       1130       1140 
ALFTVSTFEG WPALLYKAID ANAEDEGPIY NYHVEISVFF IVYIIIIAFF MMNIFVGFVI 

      1150       1160       1170       1180       1190       1200 
ITFRAQGEQE YQNCELDKNQ RQCVEYALKA QPLRRYIPKN PHQYRVWATV NSAAFEYLMF 

      1210       1220       1230       1240       1250       1260 
LLILLNTVAL AMQHYEQTAP FNYAMDILNM VFTGLFTIEM VLKIIAFKPK HYFADAWNTF 

      1270       1280       1290       1300       1310       1320 
DALIVVGSVV DIAVTEVNSS EDSSRISITF FRLFRVMRLV KLLSKGEGIR TLLWTFIKSF 

      1330       1340       1350       1360       1370       1380 
QALPYVALLI AMIFFIYAVI GMQMFGKVAL QDGTQINRNN NFQTFPQAVL LLFRCATGEA 

      1390       1400       1410       1420       1430       1440 
WQEIMLASLP GNRCDPESDF GPGEEFTCGS SFAIVYFISF FMLCAFLIIN LFVAVIMDNF 

      1450       1460       1470       1480       1490       1500 
DYLTRDWSIL GPHHLDEFKR IWSEYDPGAK GRIKHLDVVA LLRRIQPPLG FGKLCPHRVA 

      1510       1520       1530       1540       1550       1560 
CKRLVAMNVP LNSDGTVTFN ATLFALVRTS LKIKTEGNLD QANQELRMVI KKIWKRIKQK 

      1570       1580       1590       1600       1610       1620 
LLDEVIPPPD EEEVTVGKFY ATFLIQDYFR KFRRRKEKGL LGREAPTSTS SALQAGLRSL 

      1630       1640       1650       1660       1670       1680 
QDLGPEIRQA LTYDTEEEEE EEEAVGQEAE EEEAENNPEP YKDSIDSQPQ SRWNSRISVS 

      1690       1700       1710       1720       1730       1740 
LPVKEKLPDS LSTGPSDDDG LAPNSRQPSV IQAGSQPHRR SSGVFMFTIP EEGSIQLKGT 

      1750       1760       1770       1780       1790       1800 
QGQDNQNEEQ EVPDWTPDLD EQAGTPSNPV LLPPHWSQQH VNGHHVPRRR LLPPTPAGRK 

      1810       1820       1830       1840       1850       1860 
PSFTIQCLQR QGSCEDLPIP GTYHRGRTSG PSRAQGSWAA PPQKGRLLYA PLLLVEESTV 

      1870       1880       1890       1900       1910       1920 
GEGYLGKLGG PLRTFTCLQV PGAHPNPSHR KRGSADSLVE AVLISEGLGL FAQDPRFVAL 

      1930       1940       1950       1960       1970 
AKQEIADACH LTLDEMDSAA SDLLAQRTTS LYSDEESILS RFDEEDLGDE MACVHAL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL672231 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalB1AVA4.
SMRB1AVA4. Positions 386-414, 1521-1601.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB1AVA4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000115725; ENSMUSP00000111390; ENSMUSG00000031142.

Organism-specific databases

MGIMGI:1859639. Cacna1f.

Phylogenomic databases

GeneTreeENSGT00750000117620.
HOGENOMHOG000231529.
HOVERGENHBG050763.

Family and domain databases

Gene3D1.20.120.350. 5 hits.
InterProIPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR014873. VDCC_a1su_IQ.
IPR005446. VDCC_L_a1su.
IPR002077. VDCCAlpha1.
[Graphical view]
PfamPF08763. Ca_chan_IQ. 1 hit.
PF00520. Ion_trans. 4 hits.
[Graphical view]
PRINTSPR00167. CACHANNEL.
PR01630. LVDCCALPHA1.
SMARTSM01062. Ca_chan_IQ. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35546069.
SOURCESearch...

Entry information

Entry nameB1AVA4_MOUSE
AccessionPrimary (citable) accession number: B1AVA4
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)