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B1AUQ5 (B1AUQ5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Gabrq Ensembl ENSMUSP00000110200 MGI 1888498
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000110200
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification] RuleBase RU000687

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000110200

Sequences

Sequence LengthMass (Da)Tools
B1AUQ5 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: C916E3A54BC50263

FASTA52559,671
        10         20         30         40         50         60 
MGIRGMLRAA ALLLLIRTWL AESNGPSPTP KFHFELSSST PEVILDLFNC KNCANEAVVQ 

        70         80         90        100        110        120 
KILDRVLSTY DVRLRPNFGG APVPVSVSIY VSSIEQISEI NMDYTITMFL HQTWKDTRLA 

       130        140        150        160        170        180 
YYETNLNLTL DYRMHEKLWV PDCYFVNSKD AFVHDVTVEN RVFQLHPDGT VRYGIRLTTT 

       190        200        210        220        230        240 
AACSLDLQKF PMDKQSCKLE VESYGYTVED IVLSWEDDNA IHITDGLHIP QYTYLGRTIT 

       250        260        270        280        290        300 
SKEVYFYTGS YMRLIVKFQV QREVRSYLVQ VYWPTVLTTI LSWISFWMNY DSSAARVTIG 

       310        320        330        340        350        360 
LTSILVLTTI DSHMRDKLPH ISCIKAIDIY ILVCLFFVFL SLLEYVYINY LFFSQVPRRN 

       370        380        390        400        410        420 
HRRCRKPRRV VARYRYQEVV VANVQDGLIN VEDRVEDRAG PLPDSPMQAH LASQESLGSL 

       430        440        450        460        470        480 
VFTSEQAQLA TSESLSLLSS ASSQTQLATG ESLSDLPSTS EQTVPECTIH FHGFLTNDSI 

       490        500        510        520 
IPIKIHSRSD ACDDEDSEES LSSEESHGHG SSHTGRLKLQ ISQSA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL671908 Genomic DNA. No translation available.
RefSeqNP_001277364.1. NM_001290435.1.
UniGeneMm.117125.
Mm.487532.

3D structure databases

ProteinModelPortalB1AUQ5.
SMRB1AUQ5. Positions 61-351.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB1AUQ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000114553; ENSMUSP00000110200; ENSMUSG00000031344.
GeneID57249.
KEGGmmu:57249.
UCSCuc009tkr.1. mouse.

Organism-specific databases

CTD55879.
MGIMGI:1888498. Gabrq.

Phylogenomic databases

GeneTreeENSGT00630000089685.
HOGENOMHOG000049189.
HOVERGENHBG051708.
KOK05192.

Gene expression databases

ArrayExpressB1AUQ5.

Family and domain databases

Gene3D2.70.170.10. 1 hit.
InterProIPR006028. GABAA/Glycine_rcpt.
IPR008101. GABAAt_rcpt.
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PTHR18945:SF87. PTHR18945:SF87. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSPR00253. GABAARECEPTR.
PR01725. GABAARTHETA.
PR00252. NRIONCHANNEL.
SUPFAMSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
TIGRFAMsTIGR00860. LIC. 1 hit.
PROSITEPS00236. NEUROTR_ION_CHANNEL. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35546019.
SOURCESearch...

Entry information

Entry nameB1AUQ5_MOUSE
AccessionPrimary (citable) accession number: B1AUQ5
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: July 9, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)