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Protein
Submitted name:

Coiled-coil domain-containing protein 47

Gene

Ccdc47

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Coiled-coil domain-containing protein 47Imported
Gene namesi
Name:Ccdc47Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1914413. Ccdc47.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiB1AR93.
PaxDbiB1AR93.
PeptideAtlasiB1AR93.
PRIDEiB1AR93.

Expressioni

Gene expression databases

BgeeiENSMUSG00000078622.
ExpressionAtlasiB1AR93. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000002043.

Structurei

3D structure databases

SMRiB1AR93.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2357. Eukaryota.
ENOG410XREM. LUCA.
GeneTreeiENSGT00390000013997.
HOGENOMiHOG000049131.

Family and domain databases

InterProiView protein in InterPro
IPR012879. DUF1682.
PANTHERiPTHR12883. PTHR12883. 1 hit.
PfamiView protein in Pfam
PF07946. DUF1682. 1 hit.

Sequencei

Sequence statusi: Fragment.

B1AR93-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCAGMHRWTG PCLQSLNRLL SDDREGQPLK LPDTKRTLLF TFNVPGSGNT
60 70 80 90 100
YPKDMESLLP LMNMVIYSID KAKKFRLNRE GKQKADKNRA RVEENFLKLT
110 120 130
HVQRQEAAQS RREEKKRAEK ERIMNEEDPE KQRRLEVR
Length:138
Mass (Da):16,285
Last modified:April 8, 2008 - v1
Checksum:i0294B3434BD3AC20
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei138Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596331 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000137915; ENSMUSP00000117127; ENSMUSG00000078622.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596331 Genomic DNA. No translation available.

3D structure databases

SMRiB1AR93.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000002043.

Proteomic databases

MaxQBiB1AR93.
PaxDbiB1AR93.
PeptideAtlasiB1AR93.
PRIDEiB1AR93.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000137915; ENSMUSP00000117127; ENSMUSG00000078622.

Organism-specific databases

MGIiMGI:1914413. Ccdc47.

Phylogenomic databases

eggNOGiKOG2357. Eukaryota.
ENOG410XREM. LUCA.
GeneTreeiENSGT00390000013997.
HOGENOMiHOG000049131.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000078622.
ExpressionAtlasiB1AR93. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR012879. DUF1682.
PANTHERiPTHR12883. PTHR12883. 1 hit.
PfamiView protein in Pfam
PF07946. DUF1682. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB1AR93_MOUSE
AccessioniPrimary (citable) accession number: B1AR93
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: January 18, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.