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Protein
Submitted name:

Coiled-coil domain-containing protein 47

Gene

Ccdc47

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Coiled-coil domain-containing protein 47Imported
Gene namesi
Name:Ccdc47Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1914413. Ccdc47.

PTM / Processingi

Proteomic databases

PaxDbiB1AR93.
PRIDEiB1AR93.

Expressioni

Gene expression databases

BgeeiB1AR93.
ExpressionAtlasiB1AR93. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000002043.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2357. Eukaryota.
ENOG410XREM. LUCA.
GeneTreeiENSGT00390000013997.
HOGENOMiHOG000049131.

Family and domain databases

InterProiIPR012879. DUF1682.
[Graphical view]
PANTHERiPTHR12883. PTHR12883. 1 hit.
PfamiPF07946. DUF1682. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B1AR93-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCAGMHRWTG PCLQSLNRLL SDDREGQPLK LPDTKRTLLF TFNVPGSGNT
60 70 80 90 100
YPKDMESLLP LMNMVIYSID KAKKFRLNRE GKQKADKNRA RVEENFLKLT
110 120 130
HVQRQEAAQS RREEKKRAEK ERIMNEEDPE KQRRLEVR
Length:138
Mass (Da):16,285
Last modified:April 8, 2008 - v1
Checksum:i0294B3434BD3AC20
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei138 – 1381Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596331 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000137915; ENSMUSP00000117127; ENSMUSG00000078622.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596331 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000002043.

Proteomic databases

PaxDbiB1AR93.
PRIDEiB1AR93.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000137915; ENSMUSP00000117127; ENSMUSG00000078622.

Organism-specific databases

MGIiMGI:1914413. Ccdc47.

Phylogenomic databases

eggNOGiKOG2357. Eukaryota.
ENOG410XREM. LUCA.
GeneTreeiENSGT00390000013997.
HOGENOMiHOG000049131.

Miscellaneous databases

NextBioi35545706.
SOURCEiSearch...

Gene expression databases

BgeeiB1AR93.
ExpressionAtlasiB1AR93. baseline and differential.

Family and domain databases

InterProiIPR012879. DUF1682.
[Graphical view]
PANTHERiPTHR12883. PTHR12883. 1 hit.
PfamiPF07946. DUF1682. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AR93_MOUSE
AccessioniPrimary (citable) accession number: B1AR93
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: March 16, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.