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B1AR50

- B1AR50_MOUSE

UniProt

B1AR50 - B1AR50_MOUSE

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Protein
Submitted name: Gamma-aminobutyric acid receptor-associated protein
Gene
Gabarap
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. microtubule binding Source: MGI
  2. protein binding Source: MGI

GO - Biological processi

  1. autophagy Source: UniProtKB-KW
  2. microtubule cytoskeleton organization Source: MGI
Complete GO annotation...

Keywords - Biological processi

AutophagyUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyric acid receptor-associated proteinImported
Gene namesi
Name:GabarapImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:1861742. Gabarap.

Subcellular locationi

GO - Cellular componenti

  1. Golgi apparatus Source: MGI
  2. actin cytoskeleton Source: MGI
  3. lysosome Source: MGI
  4. microtubule associated complex Source: MGI
  5. plasma membrane Source: MGI
  6. smooth endoplasmic reticulum Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiB1AR50.

Structurei

3D structure databases

ProteinModelPortaliB1AR50.
SMRiB1AR50. Positions 1-57.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000012937.
HOGENOMiHOG000232034.
HOVERGENiHBG051706.

Family and domain databases

InterProiIPR004241. Atg8_like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.

Sequencei

Sequence statusi: Complete.

B1AR50-1 [UniParc]FASTAAdd to Basket

« Hide

MKFVYKEEHP FEKRRSEGEK IRKKYPDRVP VIVEKAPKAR IGDLDKKKYL    50
VPSDLTVPRW VSCTRNTMKK TSFYTLPTVM KASMVCEAAV PEVGGSILRR 100
EVALLP 106
Length:106
Mass (Da):12,195
Last modified:April 8, 2008 - v1
Checksum:iFA086579F62CE185
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596185 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000108592; ENSMUSP00000104233; ENSMUSG00000018567.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596185 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali B1AR50.
SMRi B1AR50. Positions 1-57.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B1AR50.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000108592 ; ENSMUSP00000104233 ; ENSMUSG00000018567 .

Organism-specific databases

MGIi MGI:1861742. Gabarap.

Phylogenomic databases

GeneTreei ENSGT00390000012937.
HOGENOMi HOG000232034.
HOVERGENi HBG051706.

Miscellaneous databases

ChiTaRSi GABARAP. mouse.
NextBioi 35545695.
SOURCEi Search...

Family and domain databases

InterProi IPR004241. Atg8_like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view ]
PANTHERi PTHR10969. PTHR10969. 1 hit.
Pfami PF02991. Atg8. 1 hit.
[Graphical view ]
SUPFAMi SSF54236. SSF54236. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AR50_MOUSE
AccessioniPrimary (citable) accession number: B1AR50
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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