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B1AR50

- B1AR50_MOUSE

UniProt

B1AR50 - B1AR50_MOUSE

Protein
Submitted name:

Gamma-aminobutyric acid receptor-associated protein

Gene

Gabarap

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. microtubule binding Source: MGI
    2. protein binding Source: MGI

    GO - Biological processi

    1. autophagy Source: UniProtKB-KW
    2. microtubule cytoskeleton organization Source: MGI

    Keywords - Biological processi

    AutophagyUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Gamma-aminobutyric acid receptor-associated proteinImported
    Gene namesi
    Name:GabarapImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 11

    Organism-specific databases

    MGIiMGI:1861742. Gabarap.

    Subcellular locationi

    GO - Cellular componenti

    1. actin cytoskeleton Source: MGI
    2. Golgi apparatus Source: MGI
    3. lysosome Source: MGI
    4. microtubule associated complex Source: MGI
    5. plasma membrane Source: MGI
    6. smooth endoplasmic reticulum Source: MGI

    PTM / Processingi

    Proteomic databases

    PRIDEiB1AR50.

    Structurei

    3D structure databases

    ProteinModelPortaliB1AR50.
    SMRiB1AR50. Positions 1-57.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATG8 family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00390000012937.
    HOGENOMiHOG000232034.
    HOVERGENiHBG051706.

    Family and domain databases

    InterProiIPR004241. Atg8_like.
    IPR029071. Ubiquitin-rel_dom.
    [Graphical view]
    PANTHERiPTHR10969. PTHR10969. 1 hit.
    PfamiPF02991. Atg8. 1 hit.
    [Graphical view]
    SUPFAMiSSF54236. SSF54236. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1AR50-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKFVYKEEHP FEKRRSEGEK IRKKYPDRVP VIVEKAPKAR IGDLDKKKYL    50
    VPSDLTVPRW VSCTRNTMKK TSFYTLPTVM KASMVCEAAV PEVGGSILRR 100
    EVALLP 106
    Length:106
    Mass (Da):12,195
    Last modified:April 8, 2008 - v1
    Checksum:iFA086579F62CE185
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL596185 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000108592; ENSMUSP00000104233; ENSMUSG00000018567.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL596185 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali B1AR50.
    SMRi B1AR50. Positions 1-57.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B1AR50.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000108592 ; ENSMUSP00000104233 ; ENSMUSG00000018567 .

    Organism-specific databases

    MGIi MGI:1861742. Gabarap.

    Phylogenomic databases

    GeneTreei ENSGT00390000012937.
    HOGENOMi HOG000232034.
    HOVERGENi HBG051706.

    Miscellaneous databases

    ChiTaRSi GABARAP. mouse.
    NextBioi 35545695.
    SOURCEi Search...

    Family and domain databases

    InterProi IPR004241. Atg8_like.
    IPR029071. Ubiquitin-rel_dom.
    [Graphical view ]
    PANTHERi PTHR10969. PTHR10969. 1 hit.
    Pfami PF02991. Atg8. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54236. SSF54236. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB1AR50_MOUSE
    AccessioniPrimary (citable) accession number: B1AR50
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3