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B1AR50

- B1AR50_MOUSE

UniProt

B1AR50 - B1AR50_MOUSE

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Protein
Submitted name:

Gamma-aminobutyric acid receptor-associated protein

Gene

Gabarap

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. microtubule binding Source: MGI

GO - Biological processi

  1. autophagy Source: UniProtKB-KW
  2. microtubule cytoskeleton organization Source: MGI
Complete GO annotation...

Keywords - Biological processi

AutophagyUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyric acid receptor-associated proteinImported
Gene namesi
Name:GabarapImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:1861742. Gabarap.

Subcellular locationi

GO - Cellular componenti

  1. actin cytoskeleton Source: MGI
  2. Golgi apparatus Source: MGI
  3. lysosome Source: MGI
  4. microtubule associated complex Source: MGI
  5. plasma membrane Source: MGI
  6. smooth endoplasmic reticulum Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiB1AR50.

Expressioni

Gene expression databases

ExpressionAtlasiB1AR50. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB1AR50.
SMRiB1AR50. Positions 1-57.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000012937.
HOGENOMiHOG000232034.
HOVERGENiHBG051706.

Family and domain databases

InterProiIPR004241. Atg8_like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.

Sequencei

Sequence statusi: Complete.

B1AR50-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKFVYKEEHP FEKRRSEGEK IRKKYPDRVP VIVEKAPKAR IGDLDKKKYL
60 70 80 90 100
VPSDLTVPRW VSCTRNTMKK TSFYTLPTVM KASMVCEAAV PEVGGSILRR

EVALLP
Length:106
Mass (Da):12,195
Last modified:April 8, 2008 - v1
Checksum:iFA086579F62CE185
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596185 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000108592; ENSMUSP00000104233; ENSMUSG00000018567.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596185 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali B1AR50.
SMRi B1AR50. Positions 1-57.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B1AR50.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000108592 ; ENSMUSP00000104233 ; ENSMUSG00000018567 .

Organism-specific databases

MGIi MGI:1861742. Gabarap.

Phylogenomic databases

GeneTreei ENSGT00390000012937.
HOGENOMi HOG000232034.
HOVERGENi HBG051706.

Miscellaneous databases

ChiTaRSi GABARAP. mouse.
NextBioi 35545695.
SOURCEi Search...

Gene expression databases

ExpressionAtlasi B1AR50. baseline and differential.

Family and domain databases

InterProi IPR004241. Atg8_like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view ]
PANTHERi PTHR10969. PTHR10969. 1 hit.
Pfami PF02991. Atg8. 1 hit.
[Graphical view ]
SUPFAMi SSF54236. SSF54236. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB1AR50_MOUSE
AccessioniPrimary (citable) accession number: B1AR50
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3