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Protein
Submitted name:

Gamma-aminobutyric acid receptor-associated protein

Gene

Gabarap

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

AutophagyUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyric acid receptor-associated proteinImported
Gene namesi
Name:GabarapImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1861742. Gabarap.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiB1AR50.
PeptideAtlasiB1AR50.
PRIDEiB1AR50.

Expressioni

Gene expression databases

BgeeiENSMUSG00000018567.
ExpressionAtlasiB1AR50. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB1AR50.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00390000012937.
HOGENOMiHOG000232034.
HOVERGENiHBG051706.

Family and domain databases

InterProiIPR004241. Atg8-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.

Sequencei

Sequence statusi: Complete.

B1AR50-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFVYKEEHP FEKRRSEGEK IRKKYPDRVP VIVEKAPKAR IGDLDKKKYL
60 70 80 90 100
VPSDLTVPRW VSCTRNTMKK TSFYTLPTVM KASMVCEAAV PEVGGSILRR

EVALLP
Length:106
Mass (Da):12,195
Last modified:April 8, 2008 - v1
Checksum:iFA086579F62CE185
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596185 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000108592; ENSMUSP00000104233; ENSMUSG00000018567.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596185 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliB1AR50.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiB1AR50.
PeptideAtlasiB1AR50.
PRIDEiB1AR50.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000108592; ENSMUSP00000104233; ENSMUSG00000018567.

Organism-specific databases

MGIiMGI:1861742. Gabarap.

Phylogenomic databases

GeneTreeiENSGT00390000012937.
HOGENOMiHOG000232034.
HOVERGENiHBG051706.

Miscellaneous databases

ChiTaRSiGabarap. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000018567.
ExpressionAtlasiB1AR50. baseline and differential.

Family and domain databases

InterProiIPR004241. Atg8-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB1AR50_MOUSE
AccessioniPrimary (citable) accession number: B1AR50
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: November 30, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.