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B1ANY3

- F220P_HUMAN

UniProt

B1ANY3 - F220P_HUMAN

Protein

Putative protein FAM220BP

Gene

FAM220BP

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative protein FAM220BP
    Alternative name(s):
    Protein FAM220B pseudogene
    Gene namesi
    Name:FAM220BP
    Synonyms:C9orf51
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Unplaced

    Organism-specific databases

    HGNCiHGNC:23678. FAM220BP.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 271271Putative protein FAM220BPPRO_0000344620Add
    BLAST

    Proteomic databases

    PaxDbiB1ANY3.
    PRIDEiB1ANY3.

    Expressioni

    Gene expression databases

    GenevestigatoriB1ANY3.

    Structurei

    3D structure databases

    ProteinModelPortaliB1ANY3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG298962.
    HOGENOMiHOG000111641.
    HOVERGENiHBG106751.
    InParanoidiB1ANY3.
    PhylomeDBiB1ANY3.

    Family and domain databases

    InterProiIPR029155. SIPAR.
    [Graphical view]
    PfamiPF15487. FAM220. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1ANY3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRDRRGPLGT CLAQVQWAGG GDSDKLSYSL KKRMPTEGPW PADAPSWMNK    50
    PAVDGNSQSE ALSLEMAGLS LPSGGPVLPY VKESARRNPA SAATPSAAVG 100
    LFPAPTEYFA RVSCSGVEAL GRDWLGGGPR ATHGHRGQCP KGEPRVSRLT 150
    RHQKLPEMGS FWDDPPSAFP SGLGSELEPS CLHSILSATL HACPEVLLKD 200
    ETKRIFLDLL NPMFSKQTIE FKKMFKSTSD GLQITLGLLA LQHFELANSL 250
    CHSLKYKQNN ASRLILRVVL E 271
    Length:271
    Mass (Da):29,405
    Last modified:April 8, 2008 - v1
    Checksum:i60B92EE548539102
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti162 – 1621W → R.
    Corresponds to variant rs1832322 [ dbSNP | Ensembl ].
    VAR_050820
    Natural varianti199 – 1991K → N.
    Corresponds to variant rs1832323 [ dbSNP | Ensembl ].
    VAR_050821
    Natural varianti203 – 2031K → N.
    Corresponds to variant rs12336220 [ dbSNP | Ensembl ].
    VAR_050822

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL390726 Genomic DNA. Translation: CAH73296.1.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL390726 Genomic DNA. Translation: CAH73296.1 .

    3D structure databases

    ProteinModelPortali B1ANY3.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi B1ANY3.
    PRIDEi B1ANY3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    GeneCardsi GC09P038527.
    HGNCi HGNC:23678. FAM220BP.
    neXtProti NX_B1ANY3.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG298962.
    HOGENOMi HOG000111641.
    HOVERGENi HBG106751.
    InParanoidi B1ANY3.
    PhylomeDBi B1ANY3.

    Gene expression databases

    Genevestigatori B1ANY3.

    Family and domain databases

    InterProi IPR029155. SIPAR.
    [Graphical view ]
    Pfami PF15487. FAM220. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of human chromosome 9."
      Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
      , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
      Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiF220P_HUMAN
    AccessioniPrimary (citable) accession number: B1ANY3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 22, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 9
      Human chromosome 9: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations

    External Data

    Dasty 3