Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B1ANY3 (F220P_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative protein FAM220BP
Alternative name(s):
Protein FAM220B pseudogene
Gene names
Name:FAM220BP
Synonyms:C9orf51
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length271 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Caution

Could be the product of a pseudogene.

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 271271Putative protein FAM220BP
PRO_0000344620

Natural variations

Natural variant1621W → R.
Corresponds to variant rs1832322 [ dbSNP | Ensembl ].
VAR_050820
Natural variant1991K → N.
Corresponds to variant rs1832323 [ dbSNP | Ensembl ].
VAR_050821
Natural variant2031K → N.
Corresponds to variant rs12336220 [ dbSNP | Ensembl ].
VAR_050822

Sequences

Sequence LengthMass (Da)Tools
B1ANY3 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 60B92EE548539102

FASTA27129,405
        10         20         30         40         50         60 
MRDRRGPLGT CLAQVQWAGG GDSDKLSYSL KKRMPTEGPW PADAPSWMNK PAVDGNSQSE 

        70         80         90        100        110        120 
ALSLEMAGLS LPSGGPVLPY VKESARRNPA SAATPSAAVG LFPAPTEYFA RVSCSGVEAL 

       130        140        150        160        170        180 
GRDWLGGGPR ATHGHRGQCP KGEPRVSRLT RHQKLPEMGS FWDDPPSAFP SGLGSELEPS 

       190        200        210        220        230        240 
CLHSILSATL HACPEVLLKD ETKRIFLDLL NPMFSKQTIE FKKMFKSTSD GLQITLGLLA 

       250        260        270 
LQHFELANSL CHSLKYKQNN ASRLILRVVL E 

« Hide

References

[1]"DNA sequence and analysis of human chromosome 9."
Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. expand/collapse author list , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL390726 Genomic DNA. Translation: CAH73296.1.

3D structure databases

ProteinModelPortalB1ANY3.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbB1ANY3.
PRIDEB1ANY3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GeneCardsGC09P038527.
HGNCHGNC:23678. FAM220BP.
neXtProtNX_B1ANY3.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG298962.
HOGENOMHOG000111641.
HOVERGENHBG106751.
InParanoidB1ANY3.
PhylomeDBB1ANY3.

Gene expression databases

GenevestigatorB1ANY3.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameF220P_HUMAN
AccessionPrimary (citable) accession number: B1ANY3
Entry history
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: April 8, 2008
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 9

Human chromosome 9: entries, gene names and cross-references to MIM