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Protein
Submitted name:

Probable global transcription activator SNF2L2

Gene

SMARCA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Probable global transcription activator SNF2L2Imported
Submitted name:
cDNA FLJ59976, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)Imported
Gene namesi
Name:SMARCA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

EuPathDBiHostDB:ENSG00000080503.20.
HGNCiHGNC:11098. SMARCA2.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080503.

PTM / Processingi

Proteomic databases

EPDiB1ALG1.
MaxQBiB1ALG1.

Expressioni

Gene expression databases

BgeeiENSG00000080503.
ExpressionAtlasiB1ALG1. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiB1ALG1. 2 interactors.

Structurei

3D structure databases

SMRiB1ALG1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 135BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili145 – 175Sequence analysisAdd BLAST31

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074659.
HOGENOMiHOG000049057.
HOVERGENiHBG062263.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiView protein in InterPro
IPR001487. Bromodomain.
IPR036427. Bromodomain-like_sf.
IPR018359. Bromodomain_CS.
IPR030088. SMARCA2.
PANTHERiPTHR10799:SF541. PTHR10799:SF541. 1 hit.
PfamiView protein in Pfam
PF00439. Bromodomain. 1 hit.
PRINTSiPR00503. BROMODOMAIN.
SMARTiView protein in SMART
SM00297. BROMO. 1 hit.
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiView protein in PROSITE
PS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B1ALG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEEVRLKKR KRRRNVDKDP AKEDVEKAKK RRGRPPAEKL SPNPPKLTKQ
60 70 80 90 100
MNAIIDTVIN YKDSSGRQLS EVFIQLPSRK ELPEYYELIR KPVDFKKIKE
110 120 130 140 150
RIRNHKYRSL GDLEKDVMLL CHNAQTFNLE GSQIYEDSIV LQSVFKSARQ
160 170 180 190 200
KIAKEEESED ESNEEEEEED EEESESEAKS VKVKIKLNKK DDKGRDKGKG
210 220 230
KKRPNRGKAK PVVSDFDSDE EQDEREQSEG SGTDDE
Length:236
Mass (Da):27,494
Last modified:April 8, 2008 - v1
Checksum:i7A6E90AA87F8CF7D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA. No translation available.
AL359076 Genomic DNA. No translation available.
AL591644 Genomic DNA. No translation available.
AK300093 mRNA. Translation: BAG61895.1.
UniGeneiHs.298990.
Hs.644901.

Genome annotation databases

EnsembliENST00000382183; ENSP00000371618; ENSG00000080503.
UCSCiuc064rwk.1. human.

Similar proteinsi

Entry informationi

Entry nameiB1ALG1_HUMAN
AccessioniPrimary (citable) accession number: B1ALG1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 25, 2017
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported