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Protein
Submitted name:

Probable global transcription activator SNF2L2

Gene

SMARCA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Probable global transcription activator SNF2L2Imported
Gene namesi
Name:SMARCA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

HGNCiHGNC:11098. SMARCA2.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080503.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500276180027 – 278Sequence analysisAdd BLAST252

Proteomic databases

MaxQBiB1ALF6.
PeptideAtlasiB1ALF6.
PRIDEiB1ALF6.

Expressioni

Gene expression databases

BgeeiENSG00000080503.
ExpressionAtlasiB1ALF6. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB1ALF6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini107 – 177BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili187 – 217Sequence analysisAdd BLAST31

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074659.
HOGENOMiHOG000049057.
HOVERGENiHBG062263.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiView protein in InterPro
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
PfamiView protein in Pfam
PF00439. Bromodomain. 1 hit.
PRINTSiPR00503. BROMODOMAIN.
SMARTiView protein in SMART
SM00297. BROMO. 1 hit.
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiView protein in PROSITE
PS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B1ALF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLMKRLAARC FAGLLILSPL TVISDSRPAD SGKAIEDGNL EEMEEEVRLK
60 70 80 90 100
KRKRRRNVDK DPAKEDVEKA KKRRGRPPAE KLSPNPPKLT KQMNAIIDTV
110 120 130 140 150
INYKDSSGRQ LSEVFIQLPS RKELPEYYEL IRKPVDFKKI KERIRNHKYR
160 170 180 190 200
SLGDLEKDVM LLCHNAQTFN LEGSQIYEDS IVLQSVFKSA RQKIAKEEES
210 220 230 240 250
EDESNEEEEE EDEEESESEA KSVKVKIKLN KKDDKGRDKG KGKKRPNRGK
260 270
AKPVVSDFDS DEEQDEREQS EGSGTDDE
Length:278
Mass (Da):31,979
Last modified:April 8, 2008 - v1
Checksum:i5766E7798DBF003B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA. No translation available.
AL359076 Genomic DNA. No translation available.
AL591644 Genomic DNA. No translation available.
RefSeqiNP_001276329.1. NM_001289400.1.
UniGeneiHs.298990.
Hs.644901.

Genome annotation databases

EnsembliENST00000302401; ENSP00000305411; ENSG00000080503.
GeneIDi6595.
UCSCiuc003zhe.4. human.

Similar proteinsi

Entry informationi

Entry nameiB1ALF6_HUMAN
AccessioniPrimary (citable) accession number: B1ALF6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: August 30, 2017
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported