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Protein
Submitted name:

Putative peripheral benzodiazepine receptor-related protein

Gene

TSPO

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative peripheral benzodiazepine receptor-related proteinImported
Gene namesi
Name:TSPOImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 22

Organism-specific databases

EuPathDBiHostDB:ENSG00000100300.17.
HGNCiHGNC:1158. TSPO.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 68HelicalSequence analysisAdd BLAST17

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000100300.

PTM / Processingi

Proteomic databases

EPDiB1AH87.
MaxQBiB1AH87.
PaxDbiB1AH87.
PeptideAtlasiB1AH87.
PRIDEiB1AH87.

Expressioni

Gene expression databases

BgeeiENSG00000100300.
ExpressionAtlasiB1AH87. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiB1AH87. 2 interactors.

Structurei

3D structure databases

ProteinModelPortaliB1AH87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3797. Eukaryota.
COG3476. LUCA.
GeneTreeiENSGT00390000012980.
HOGENOMiHOG000224659.
HOVERGENiHBG001296.

Family and domain databases

CDDicd15904. TSPO_MBR. 1 hit.
InterProiView protein in InterPro
IPR030164. TSPO.
IPR004307. TspO_MBR.
PANTHERiPTHR10057. PTHR10057. 1 hit.
PTHR10057:SF10. PTHR10057:SF10. 1 hit.
PfamiView protein in Pfam
PF03073. TspO_MBR. 1 hit.

Sequencei

Sequence statusi: Fragment.

B1AH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPWVPAMG FTLAPSLGCF VGSRFVHGEG LRWYAGLQKP SWHPPHWVLG
60 70 80 90 100
PVWGTLYSAM GYGSYLVWKE LGGFTEKAVV PLGLYTGQLA LNWAWPPIFF

GARQMGW
Length:107
Mass (Da):11,896
Last modified:April 8, 2008 - v1
Checksum:i26DF39D8A64DEEB1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei107Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z82214 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000428336; ENSP00000405685; ENSG00000100300.
UCSCiuc062exi.1. human.

Similar proteinsi

Entry informationi

Entry nameiB1AH87_HUMAN
AccessioniPrimary (citable) accession number: B1AH87
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: September 27, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported