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Protein
Submitted name:

Putative peripheral benzodiazepine receptor-related protein

Gene

TSPO

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative peripheral benzodiazepine receptor-related proteinImported
Gene namesi
Name:TSPOImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 22

Organism-specific databases

EuPathDBiHostDB:ENSG00000100300.17.
HGNCiHGNC:1158. TSPO.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 68HelicalSequence analysisAdd BLAST17

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000100300.

PTM / Processingi

Proteomic databases

EPDiB1AH87.
MaxQBiB1AH87.
PeptideAtlasiB1AH87.
PRIDEiB1AH87.

Expressioni

Gene expression databases

BgeeiENSG00000100300.
ExpressionAtlasiB1AH87. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiB1AH87. 2 interactors.

Structurei

3D structure databases

ProteinModelPortaliB1AH87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3797. Eukaryota.
COG3476. LUCA.
GeneTreeiENSGT00390000012980.
HOGENOMiHOG000224659.
HOVERGENiHBG001296.

Family and domain databases

CDDicd15904. TSPO_MBR. 1 hit.
Gene3Di1.20.1260.100. 1 hit.
InterProiView protein in InterPro
IPR030164. TSPO.
IPR038330. TspO/MBR-related_sf.
IPR004307. TspO_MBR.
PANTHERiPTHR10057. PTHR10057. 1 hit.
PTHR10057:SF5. PTHR10057:SF5. 1 hit.
PfamiView protein in Pfam
PF03073. TspO_MBR. 1 hit.

Sequencei

Sequence statusi: Fragment.

B1AH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPWVPAMG FTLAPSLGCF VGSRFVHGEG LRWYAGLQKP SWHPPHWVLG
60 70 80 90 100
PVWGTLYSAM GYGSYLVWKE LGGFTEKAVV PLGLYTGQLA LNWAWPPIFF

GARQMGW
Length:107
Mass (Da):11,896
Last modified:April 8, 2008 - v1
Checksum:i26DF39D8A64DEEB1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei107Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z82214 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000428336; ENSP00000405685; ENSG00000100300.
UCSCiuc062exi.1. human.

Similar proteinsi

Entry informationi

Entry nameiB1AH87_HUMAN
AccessioniPrimary (citable) accession number: B1AH87
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: March 28, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported