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B0VX84 (B0VX84_CALJA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Axin-1 isoform a EMBL JAB25865.1
Gene names
Name:AXIN1 EMBL ABZ80343.1
OrganismCallithrix jacchus (White-tufted-ear marmoset) EMBL ABZ80343.1
Taxonomic identifier9483 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrix

Protein attributes

Sequence length867 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 RGS domain. RuleBase RU003298

Contains RGS domain. SAAS SAAS024066

Sequences

Sequence LengthMass (Da)Tools
B0VX84 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: F2828082A0A57ECF

FASTA86796,196
        10         20         30         40         50         60 
MNVQEQGFPL DLGASFTEDA PRPPVPGEEG ELVSTDLRPA NYSFCSGKGV GIKGETSTAT 

        70         80         90        100        110        120 
PRRSDLDLGY EPEGSASPTP PYLKWAESLH SLLDDQDGIS LFRTFLKQEG CADLLDFWFA 

       130        140        150        160        170        180 
CTGFRKLEPC DSNEEKRLKL ARAIYRKYIL DNNGIVSRQT KPATKSFIKG CIMKQLIDPA 

       190        200        210        220        230        240 
MFDQAQTEIQ TTMEENTYPS FLKSDIYLEY TRTGSESPKV CSDQSSGSGT GKGISGYLPT 

       250        260        270        280        290        300 
LNEDEEWKCD QDVDEDDGRD TAPPGRLPQK LLLETAAPRA SSSRRYSEGR EFRYGSWREP 

       310        320        330        340        350        360 
VNPYYVNAGY ALAPATSAND SEQQSLSSDA DTLSLTDSSV DGMPPYRIRK QHRREMQESV 

       370        380        390        400        410        420 
QVNGRVPLPH IPRTYRVPKE VRVEPQKFAE ELIHRLEAVQ RTREAEEKLE ERLKRVRMEE 

       430        440        450        460        470        480 
EGEDGDPSSG PPGPCHKLPL TATWYHFPPR CVDVGCAGLR DAHEENPESI LDEHVQRVLR 

       490        500        510        520        530        540 
TPGRQSPGPG HRSPDSGHVA KMPVALGGAA SGHGKHVPKS GAKLDAAGLH HHRHVHHHVH 

       550        560        570        580        590        600 
HSTARPKEQV EAEAARRAQS SFAWGLEPHI HGAKPRGYSE SVGAAPNASD GLGHSGKVGM 

       610        620        630        640        650        660 
ACKRNAKKAE SGRNASTEVQ GASEDTEKNQ KIMQWIIEGE KEISRHRRAG HGSSGTRKPQ 

       670        680        690        700        710        720 
SHENSRPLSL ERSGTVHPWA GSQLRTSVQP SHLFIQDPTM PPHPAPNPLT QLEEARRRLE 

       730        740        750        760        770        780 
EEEKRASRAP SKQRYVQEVM RRGRACVRPA CAPVLRVVPA VSDMELSETE ARSQRKAGGG 

       790        800        810        820        830        840 
STQACDSIVV AYYFCGEPIP YRTLVRGRAI TLGQFKELLT KKGSYRYYFK KVSDEFDCGV 

       850        860 
VFEEVREDGA VLPVFEEKII GKVEKVD 

« Hide

References

[1]"NISC Comparative Sequencing Initiative."
Antonellis A., Benjamin B., Blakesley R.W., Bouffard G.G., Brinkley C., Brooks S., Chu G., Chub I., Coleman H., Fuksenko T., Gestole M., Gregory M., Guan X., Gupta J., Gurson N., Han E., Han J., Hansen N. expand/collapse author list , Hargrove A., Hines-Harris K., Ho S.-L., Hu P., Hunter G., Hurle B., Idol J.R., Johnson T., Knight E., Kwong P., Lee-Lin S.-Q., Legaspi R., Madden M., Maduro Q.L., Maduro V.B., Margulies E.H., Masiello C., Maskeri B., McDowell J., Merkulov G., Montemayor C., Mullikin J.C., Park M., Prasad A., Ramsahoye C., Reddix-Dugue N., Riebow N., Schandler K., Schueler M.G., Sison C., Smith L., Stantripop S., Thomas J.W., Thomas P.J., Tsipouri V., Young A., Green E.D.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences."
Maudhoo M.D., Ren D., Grandnigo J.S., Gibbs R.M., Lubker A.C., Moriyama E.N., French J.A., Norgren R.B.Jr.
Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cerebellum EMBL JAB48828.1 and Cerebral cortex EMBL JAB25865.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP000588 Genomic DNA. Translation: ABZ80343.1.
GAMR01008067 mRNA. Translation: JAB25865.1.
GAMP01003927 mRNA. Translation: JAB48828.1.

3D structure databases

ProteinModelPortalB0VX84.
SMRB0VX84. Positions 74-220, 785-867.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000231228.
HOVERGENHBG004324.

Family and domain databases

Gene3D1.10.196.10. 2 hits.
InterProIPR014936. Axin_b-cat-bd.
IPR001158. DIX.
IPR024066. Regulat_G_prot_signal_dom1.
IPR016137. Regulat_G_prot_signal_superfam.
IPR000342. RGS_dom.
[Graphical view]
PfamPF08833. Axin_b-cat_bind. 1 hit.
PF00778. DIX. 1 hit.
PF00615. RGS. 1 hit.
[Graphical view]
PRINTSPR01301. RGSPROTEIN.
SMARTSM00021. DAX. 1 hit.
SM00315. RGS. 1 hit.
[Graphical view]
SUPFAMSSF48097. SSF48097. 1 hit.
PROSITEPS50841. DIX. 1 hit.
PS50132. RGS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0VX84_CALJA
AccessionPrimary (citable) accession number: B0VX84
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)