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B0VTR7 (B0VTR7_ACIBS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Isocitrate dehydrogenase EMBL CAP00354.1
EC=1.1.1.42 EMBL CAP00354.1
Gene names
Name:idh EMBL CAP00354.1
Ordered Locus Names:ABSDF0995 EMBL CAP00354.1
OrganismAcinetobacter baumannii (strain SDF) [Complete proteome] [HAMAP]
Taxonomic identifier509170 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Acinetobacter › Acinetobacter calcoaceticus/baumannii complex ›

Protein attributes

Sequence length745 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region134 – 1418Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3521Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5511Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5551Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1471Substrate By similarity PIRSR PIRSR009407-2
Binding site5501Substrate By similarity PIRSR PIRSR009407-2
Site2571Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4221Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
B0VTR7 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: F200A5A1C5F29EFA

FASTA74582,640
        10         20         30         40         50         60 
MAGEKSTIIY TLTDEAPLLA TYSLLPIIET FTKPAGIEIV KSDISVAARV LAEFADYLSE 

        70         80         90        100        110        120 
EQKVSDNLAE LGRLTQDPDT NIIKLPNISA SVAQLTACIK ELQSKGYAIP DYPENPATEE 

       130        140        150        160        170        180 
EKTIKARYGK CLGSAVNPVL REGNSDRRAP AAVKNYAKKH PHSMSEWKQW SQTHVSHMEE 

       190        200        210        220        230        240 
GDFYHGEKSM TLDRPRNVKM ELITNSGKSI VLKPKVALQE GEIIDSMFMS KKALCDFYEK 

       250        260        270        280        290        300 
QLDDCREAGI LFSLHVKATM MKVSHPIVFG HCVKIYYKEA FEKHGKLFDE LGINVNNGMA 

       310        320        330        340        350        360 
GLYEKIETLP TSLREEIIED LHACQEHRPA LAMVDSAKGI TNFHSPNDII VDASMPAMIR 

       370        380        390        400        410        420 
AGGKMWGADG KQYDAKAVMP ESTFARIYQE MINFCKWHGN FDPKTMGTVP NVGLMAQKAE 

       430        440        450        460        470        480 
EYGSHDKTFE IPEAGIANIT DLDTGEVLLT QNVEEGDIWR MCQVKDAPIR DWVKLAVTRA 

       490        500        510        520        530        540 
RNSGMPAIFW LDPYRPHENE LIKKVQKYLK DHDTTGLDIQ IMSQVRAMRY TLERVVRGLD 

       550        560        570        580        590        600 
TISVTGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN 

       610        620        630        640        650        660 
HLRWDSLGEF LALAVSLEEM GIKENNARAK LLAKTLDEAT GKLLDNDKSP SRRTGELDNR 

       670        680        690        700        710        720 
GSHFYLSLYW AEALAAQNED AELKAKFAPL AKALAENEQK IVAELAQVQG KPADIGGYYA 

       730        740 
VDPAKVSAVM RPSATFNAAL STVQA

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References

[1]"Comparative analysis of Acinetobacters: three genomes for three lifestyles."
Vallenet D., Nordmann P., Barbe V., Poirel L., Mangenot S., Bataille E., Dossat C., Gas S., Kreimeyer A., Lenoble P., Oztas S., Poulain J., Segurens B., Robert C., Abergel C., Claverie J.-M., Raoult D., Medigue C., Weissenbach J., Cruveiller S.
PLoS ONE 3:e1805-e1805(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SDF EMBL CAP00354.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU468230 Genomic DNA. Translation: CAP00354.1.
RefSeqYP_001706521.1. NC_010400.1.

3D structure databases

ProteinModelPortalB0VTR7.
SMRB0VTR7. Positions 8-741.
ModBaseSearch...

Protein-protein interaction databases

STRING509170.ABSDF0995.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP00354; CAP00354; ABSDF0995.
GeneID5984541.
KEGGabm:ABSDF0995.
PATRIC20732900. VBIAciBau88365_0972.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMAPRTMGTV.
ProtClustDBCLSK867411.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0VTR7_ACIBS
AccessionPrimary (citable) accession number: B0VTR7
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info