Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot B0VP52 (PSD_ACIBS)

Last modified November 3, 2009. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Hide | Top

Names and origin

Protein namesRecommended name:
    Phosphatidylserine decarboxylase proenzyme
    EC=4.1.1.65
Cleaved into the following 2 chains:
    1- Recommended name:
            Phosphatidylserine decarboxylase alpha chain
    2- Recommended name:
            Phosphatidylserine decarboxylase beta chain
Gene names
Name: psd
Ordered Locus Names: ABSDF3526
OrganismAcinetobacter baumannii (strain SDF) [Complete proteome] [HAMAP]
Taxonomic identifier509170 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Acinetobacter

Hide | Top

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

Hide | Top

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662

Cofactor

Pyruvoyl group By similarity.

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily.

Hide | Top

Ontologies

Keywords
   Biological processPhospholipid biosynthesis
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   PTMZymogen
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processphospholipid biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Molecular functionphosphatidylserine decarboxylase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 249249Phosphatidylserine decarboxylase beta chain By similarity
PRO_1000131322
Chain250 – 28334Phosphatidylserine decarboxylase alpha chain By similarity
PRO_1000131323

Sites

Site249 – 2502Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue2501Pyruvic acid (Ser) By similarity

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
B0VP52-1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 024E9A59A36385EA

FASTA28331,283
        10         20         30         40         50         60 
MSFTSRLKKE LFIKAQNLVP QHQLSRVVGK VAASENPILK AAVIHAFKTK YGIDLSIAEQ 

        70         80         90        100        110        120 
GNALKYKSFN DFFTRALKDG VRLVDENPDS IVSPADGAIS QIGKITAGKV FQAKGQSFSV 

       130        140        150        160        170        180 
EKLIGDPQLA QPFQEGEFAT VYLSPRDYHR VHMPFSGILT ETLYVPGELF SVNQVTAENV 

       190        200        210        220        230        240 
PGLFARNERM VCLFDTELGR MAVVLVGAMI VAGIETVATG KVKPSGRIEL QHHELKLEKG 

       250        260        270        280 
AELGRFYLGS TAIILFEKDK IEWEKRFKAE SVVVMGERMG HTL

« Hide

Hide | Top

References

[1]"Comparative analysis of Acinetobacters: three genomes for three lifestyles."
Vallenet D., Nordmann P., Barbe V., Poirel L., Mangenot S., Bataille E., Dossat C., Gas S., Kreimeyer A., Lenoble P., Oztas S., Poulain J., Segurens B., Robert C., Abergel C., Claverie J.-M., Raoult D., Medigue C., Weissenbach J., Cruveiller S.
PLoS ONE 3:E1805-E1805(2008) [PubMed: 18350144] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Hide | Top

Cross-references

Sequence databases

CU468230 Genomic DNA. Translation: CAP02788.1.
RefSeqYP_001708547.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID5986312.
GenomeReviewsGene locus ABSDF3526 in contig CU468230_GR.
KEGGabm:ABSDF3526.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAYVPGRLF.

Family and domain databases

HAMAPMF_00662.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

Hide | Top

Entry information

Entry namePSD_ACIBS
AccessionPrimary (citable) accession number: B0VP52
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 8, 2008
Last modified: November 3, 2009
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Hide | Top

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents