B0VEF3 (B0VEF3_ACIBY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699
EC=6.2.1.5 RuleBase RU000699

Gene names

Name:	sucD EMBL CAM85740.1
Ordered Locus Names:	ABAYE0784 EMBL CAM85740.1

Organism

Acinetobacter baumannii (strain AYE) [Complete proteome] [HAMAP]

Taxonomic identifier

509173 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Acinetobacter › Acinetobacter calcoaceticus/baumannii complex › Acinetobacter baumannii

Protein attributes

Sequence length	296 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + succinate + CoA = ADP + phosphate + succinyl-CoA. RuleBase RU000699
Subunit structure	Heterotetramer of two alpha and two beta subunits By similarity. RuleBase RU000699
Sequence similarities	Belongs to the succinate/malate CoA ligase alpha subunit family. RuleBase RU000677

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000699 Nucleotide-binding
Molecular function	Ligase RuleBase RU000677 EMBL CAM85740.1
PTM	Phosphoprotein RuleBase RU000677
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP citrate synthase activity Inferred from electronic annotation. Source: InterPro cofactor binding Inferred from electronic annotation. Source: InterPro succinate-CoA ligase (ADP-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	249	1	Tele-phosphohistidine intermediate By similarity PIRSR PIRSR001553-1

Sequences

	Sequence		Length	Mass (Da)
	B0VEF3 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: C058EDD2BA17CF92	FASTA	296	30,693
	10 20 30 40 50 60 MSVLINKDTK VLVQGFTGKN GTFHSAQALD YGTKVVGGVT PGKGGTTHLD LPVFNTMKEA 70 80 90 100 110 120 VRETNADASV IYVPAPFVLD SIVEAVDSGV GLIVVITEGV PTIDMLKAKR YLETNGNGTR 130 140 150 160 170 180 LVGPNCPGVI TPGECKIGIM PGHIHQPGRI GIISRSGTLT YEAVAQTTKL GLGQSTCIGI 190 200 210 220 230 240 GGDPIPGMNQ IEALQLFQDD PDTDAIIMIG EIGGTAEEEA AEFIKSNVTK PVVGYIAGVT 250 260 270 280 290 APKGKRMGHA GAIISGGQGT AEEKFAAFEK AGMAYTRSPA ELGSTMLQVL KEKGLA

References

[1]

"Comparative analysis of Acinetobacters: three genomes for three lifestyles." Vallenet D., Nordmann P., Barbe V., Poirel L., Mangenot S., Bataille E., Dossat C., Gas S., Kreimeyer A., Lenoble P., Oztas S., Poulain J., Segurens B., Robert C., Abergel C., Claverie J.-M., Raoult D., Medigue C., Weissenbach J., Cruveiller S. PLoS ONE 3:e1805-e1805(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AYE EMBL CAM85740.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU459141 Genomic DNA. Translation: CAM85740.1.
RefSeq	YP_001712743.1. NC_010410.1.
3D structure databases
ProteinModelPortal	B0VEF3.
SMR	B0VEF3. Positions 2-291.
ModBase	Search...
Protein-protein interaction databases
STRING	509173.ABAYE0784.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAM85740; CAM85740; ABAYE0784.
GeneID	6003925.
KEGG	aby:ABAYE0784.
PATRIC	20725033. VBIAciBau69881_0848.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0074.
HOGENOM	HOG000239685.
KO	K01902.
OMA	TRCIGIG.
ProtClustDB	PRK05678.
Enzyme and pathway databases
BioCyc	ABAU509173:GJXF-785-MONOMER.
Family and domain databases
Gene3D	3.40.50.261. 1 hit. 3.40.50.720. 1 hit.
InterPro	IPR017440. Cit_synth/succinyl-CoA_lig_AS. IPR003781. CoA-bd. IPR005810. CoA_lig_alpha. IPR005811. CoA_ligase. IPR016040. NAD(P)-bd_dom. IPR016102. Succinyl-CoA_synth-like. [Graphical view]
Pfam	PF02629. CoA_binding. 1 hit. PF00549. Ligase_CoA. 1 hit. [Graphical view]
PIRSF	PIRSF001553. SucCS_alpha. 1 hit.
PRINTS	PR01798. SCOASYNTHASE.
SMART	SM00881. CoA_binding. 1 hit. [Graphical view]
SUPFAM	SSF52210. CoA_ligase. 1 hit.
TIGRFAMs	TIGR01019. sucCoAalpha. 1 hit.
PROSITE	PS01216. SUCCINYL_COA_LIG_1. 1 hit. PS00399. SUCCINYL_COA_LIG_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0VEF3_ACIBY

Accession

Primary (citable) accession number: B0VEF3

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)