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B0V218

- B0V218_DANRE

UniProt

B0V218 - B0V218_DANRE

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Protein
Submitted name:

Uncharacterized protein

Gene

abi2a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. actin polymerization or depolymerization Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:abi2aImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 9

Organism-specific databases

ZFINiZDB-GENE-060929-192. abi2a.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiB0V218.

Structurei

3D structure databases

ProteinModelPortaliB0V218.
SMRiB0V218. Positions 406-470.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000003756.
HOVERGENiHBG050446.
InParanoidiB0V218.
KOiK05751.
OMAiVNGGPFY.
PhylomeDBiB0V218.
TreeFamiTF314303.

Family and domain databases

InterProiIPR028457. ABI.
IPR028454. Abi2.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PTHR10460:SF3. PTHR10460:SF3. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0V218-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAELQMLLEE EIPAGRRALL DSFTNLDRVA EYCESNYVQA PDKHVALEET
60 70 80 90 100
KNYTTQSLAS VAYLINTLAN NVLQMLDIQA SQLRRMESSI NHISQTVDIH
110 120 130 140 150
KEKVARREIG ILTTNKNTSR THKIIAPANP ERPVRYIRKP IDYSMLDDIG
160 170 180 190 200
HGVKVNTQNM KMGSLLRTTP PTQKPPSPPM AGKGTIGRHS PYRTLEPVRP
210 220 230 240 250
PVVPNDYVPS PTRNMVPILH QSPVRTASVN QRNRTYSSGS SGGSHPSSRS
260 270 280 290 300
SSRENSGSGS VGLPIAVPTP SPPSAFPGAP QFYSMNRPVP RQTAPSVGGS
310 320 330 340 350
LPYRRPPSLT GQTSMPPSQQ NGGPYYNQSQ ASVAPPPPSV LQITPQLPLT
360 370 380 390 400
GFVARVQETI TDAPPPSPPS EEPMFDDTQN PAAPPEGYEE EESSVVEYSD
410 420 430 440 450
PYAEEDPPWA PQTYLEKVVA IYDYVRDKED ELSFQEGAII YVIKKNDDGW
460 470
YEGVMSGTTG LFPGNYVESI MHYTE
Length:475
Mass (Da):52,255
Last modified:April 8, 2008 - v1
Checksum:iF549DF58F1EA5844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571704 Genomic DNA. No translation available.
CR936378 Genomic DNA. No translation available.
RefSeqiNP_001070054.2. NM_001076586.2.
UniGeneiDr.133461.

Genome annotation databases

EnsembliENSDART00000141314; ENSDARP00000118040; ENSDARG00000058207.
GeneIDi767646.
KEGGidre:767646.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571704 Genomic DNA. No translation available.
CR936378 Genomic DNA. No translation available.
RefSeqi NP_001070054.2. NM_001076586.2.
UniGenei Dr.133461.

3D structure databases

ProteinModelPortali B0V218.
SMRi B0V218. Positions 406-470.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B0V218.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000141314 ; ENSDARP00000118040 ; ENSDARG00000058207 .
GeneIDi 767646.
KEGGi dre:767646.

Organism-specific databases

CTDi 767646.
ZFINi ZDB-GENE-060929-192. abi2a.

Phylogenomic databases

GeneTreei ENSGT00390000003756.
HOVERGENi HBG050446.
InParanoidi B0V218.
KOi K05751.
OMAi VNGGPFY.
PhylomeDBi B0V218.
TreeFami TF314303.

Miscellaneous databases

NextBioi 20918040.

Family and domain databases

InterProi IPR028457. ABI.
IPR028454. Abi2.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view ]
PANTHERi PTHR10460. PTHR10460. 1 hit.
PTHR10460:SF3. PTHR10460:SF3. 1 hit.
Pfami PF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view ]
PRINTSi PR00452. SH3DOMAIN.
SMARTi SM00326. SH3. 1 hit.
[Graphical view ]
SUPFAMi SSF50044. SSF50044. 1 hit.
PROSITEi PS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.
  2. Ensembl
    Submitted (MAY-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.

Entry informationi

Entry nameiB0V218_DANRE
AccessioniPrimary (citable) accession number: B0V218
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3