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B0V218

- B0V218_DANRE

UniProt

B0V218 - B0V218_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

abi2a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (08 Apr 2008)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. actin polymerization or depolymerization Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:abi2aImported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 9

    Organism-specific databases

    ZFINiZDB-GENE-060929-192. abi2a.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiB0V218.

    Structurei

    3D structure databases

    ProteinModelPortaliB0V218.
    SMRiB0V218. Positions 406-470.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000003756.
    HOVERGENiHBG050446.
    KOiK05751.
    OMAiVNGGPFY.
    PhylomeDBiB0V218.
    TreeFamiTF314303.

    Family and domain databases

    InterProiIPR028457. ABI.
    IPR028454. Abi2.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view]
    PANTHERiPTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF3. PTHR10460:SF3. 1 hit.
    PfamiPF07815. Abi_HHR. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view]
    PRINTSiPR00452. SH3DOMAIN.
    SMARTiSM00326. SH3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50044. SSF50044. 1 hit.
    PROSITEiPS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B0V218-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAELQMLLEE EIPAGRRALL DSFTNLDRVA EYCESNYVQA PDKHVALEET    50
    KNYTTQSLAS VAYLINTLAN NVLQMLDIQA SQLRRMESSI NHISQTVDIH 100
    KEKVARREIG ILTTNKNTSR THKIIAPANP ERPVRYIRKP IDYSMLDDIG 150
    HGVKVNTQNM KMGSLLRTTP PTQKPPSPPM AGKGTIGRHS PYRTLEPVRP 200
    PVVPNDYVPS PTRNMVPILH QSPVRTASVN QRNRTYSSGS SGGSHPSSRS 250
    SSRENSGSGS VGLPIAVPTP SPPSAFPGAP QFYSMNRPVP RQTAPSVGGS 300
    LPYRRPPSLT GQTSMPPSQQ NGGPYYNQSQ ASVAPPPPSV LQITPQLPLT 350
    GFVARVQETI TDAPPPSPPS EEPMFDDTQN PAAPPEGYEE EESSVVEYSD 400
    PYAEEDPPWA PQTYLEKVVA IYDYVRDKED ELSFQEGAII YVIKKNDDGW 450
    YEGVMSGTTG LFPGNYVESI MHYTE 475
    Length:475
    Mass (Da):52,255
    Last modified:April 8, 2008 - v1
    Checksum:iF549DF58F1EA5844
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX571704 Genomic DNA. No translation available.
    CR936378 Genomic DNA. No translation available.
    RefSeqiNP_001070054.2. NM_001076586.2.
    UniGeneiDr.133461.

    Genome annotation databases

    EnsembliENSDART00000141314; ENSDARP00000118040; ENSDARG00000058207.
    GeneIDi767646.
    KEGGidre:767646.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX571704 Genomic DNA. No translation available.
    CR936378 Genomic DNA. No translation available.
    RefSeqi NP_001070054.2. NM_001076586.2.
    UniGenei Dr.133461.

    3D structure databases

    ProteinModelPortali B0V218.
    SMRi B0V218. Positions 406-470.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B0V218.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000141314 ; ENSDARP00000118040 ; ENSDARG00000058207 .
    GeneIDi 767646.
    KEGGi dre:767646.

    Organism-specific databases

    CTDi 767646.
    ZFINi ZDB-GENE-060929-192. abi2a.

    Phylogenomic databases

    GeneTreei ENSGT00390000003756.
    HOVERGENi HBG050446.
    KOi K05751.
    OMAi VNGGPFY.
    PhylomeDBi B0V218.
    TreeFami TF314303.

    Miscellaneous databases

    NextBioi 20918040.

    Family and domain databases

    InterProi IPR028457. ABI.
    IPR028454. Abi2.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view ]
    PANTHERi PTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF3. PTHR10460:SF3. 1 hit.
    Pfami PF07815. Abi_HHR. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view ]
    PRINTSi PR00452. SH3DOMAIN.
    SMARTi SM00326. SH3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50044. SSF50044. 1 hit.
    PROSITEi PS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.
    2. Ensembl
      Submitted (MAY-2013) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiB0V218_DANRE
    AccessioniPrimary (citable) accession number: B0V218
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 8, 2008
    Last sequence update: April 8, 2008
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3