Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B0V1P2

- B0V1P2_DANRE

UniProt

B0V1P2 - B0V1P2_DANRE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Uncharacterized protein

Gene

zgc:163121

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:zgc:163121Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 2

Organism-specific databases

ZFINiZDB-GENE-070424-80. zgc:163121.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000103502.

Structurei

3D structure databases

ProteinModelPortaliB0V1P2.
SMRiB0V1P2. Positions 46-543.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000119205.
HOGENOMiHOG000005382.
HOVERGENiHBG004980.
InParanoidiB0V1P2.
KOiK01580.
OMAiVAPRIKG.
OrthoDBiEOG7H1JM3.
PhylomeDBiB0V1P2.
TreeFamiTF314688.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0V1P2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTRSPESIMD FTQADRRHLD KSKQDTSSLE NTDDGLKYDS GRVTHDFSCI
60 70 80 90 100
HSKDLLPAED GEEATKHFLQ ELVNILLAYI SKSLKRSTKV LDFHYPHQLN
110 120 130 140 150
EGLEGFSLEL PDQPDNLEQL LVDCRDTLKY GVKTGHPRFF NQLSTGLDIV
160 170 180 190 200
GLAGEWLTST ANTNMFTYEI SPVFILMEEV VLRKMHTIIG WPEEDGDGIF
210 220 230 240 250
CPGGSMSNLY SVLLARFHLF PAVKTHGMCA IPRLAMFTSA HSHYSIKKSA
260 270 280 290 300
AVLGIGTENV IVVRCDERGK MISSELNSSI EEAKSKGLVP FYVNATAGTT
310 320 330 340 350
VYGAFDPLHK IADICEHHGL WMHVDAAWGG GLLLSNKHRV KLHGIERAHS
360 370 380 390 400
VTWNPHKMMG VPLQCSTILV KRKGLLQQCN QLCAEYLFQP DKHYEVSYDT
410 420 430 440 450
GDKSIQCGRH VDIFKLWLMW KAKGSEGFES QVNHCLENAE YLYYKLKRRT
460 470 480 490 500
DFQLVFKGKP EHSNVCFWYL PKRVQNIPLG PEREKELHMV APKIKTKMME
510 520 530 540
EGFTMIGYQP LEDKVNFFRC VFSNPATQRE DVDFLLDEIV RLGCEL
Length:546
Mass (Da):62,070
Last modified:April 8, 2008 - v1
Checksum:i7258EFCC8CDD28B2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR925777 Genomic DNA. No translation available.
CU693487 Genomic DNA. No translation available.
RefSeqiNP_001083039.2. NM_001089570.2.
UniGeneiDr.91046.

Genome annotation databases

EnsembliENSDART00000109561; ENSDARP00000103502; ENSDARG00000055370.
GeneIDi100038790.
KEGGidre:100038790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR925777 Genomic DNA. No translation available.
CU693487 Genomic DNA. No translation available.
RefSeqi NP_001083039.2. NM_001089570.2.
UniGenei Dr.91046.

3D structure databases

ProteinModelPortali B0V1P2.
SMRi B0V1P2. Positions 46-543.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000103502.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000109561 ; ENSDARP00000103502 ; ENSDARG00000055370 .
GeneIDi 100038790.
KEGGi dre:100038790.

Organism-specific databases

ZFINi ZDB-GENE-070424-80. zgc:163121.

Phylogenomic databases

GeneTreei ENSGT00760000119205.
HOGENOMi HOG000005382.
HOVERGENi HBG004980.
InParanoidi B0V1P2.
KOi K01580.
OMAi VAPRIKG.
OrthoDBi EOG7H1JM3.
PhylomeDBi B0V1P2.
TreeFami TF314688.

Miscellaneous databases

NextBioi 20788577.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.
  2. Ensembl
    Submitted (AUG-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.

Entry informationi

Entry nameiB0V1P2_DANRE
AccessioniPrimary (citable) accession number: B0V1P2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 29, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3