Novel protein simiar to human and murine UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (GALNT2)

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Unreviewed, UniProtKB/TrEMBL B0V0U4 (B0V0U4_DANRE)

Last modified November 3, 2009. Version 16. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein names

Submitted name:
Novel protein simiar to human and murine UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (GALNT2) EMBL CAQ15398.1

Gene names

Name:	si:dkey-162b3.1 ZFIN ZDB-GENE-041111-110
Synonyms:	im:7140357 ZFIN ZDB-GENE-041111-110
ORF Names:	DKEY-162B3.1-001 EMBL CAQ15398.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAQ15398.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

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Protein attributes

Sequence length	559 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

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General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

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Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

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Sequences

Sequence

Length

Mass (Da)

Tools

B0V0U4-1 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: FDECD9DF8A163FE5
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FASTA

559

63,954

        10         20         30         40         50         60 
MRRKSRMYLC FAVLWVLGIA YYFYSGTTLS RKDDWSGINS NRIQTHSNAD DKDHSLESLP 

        70         80         90        100        110        120 
LGKVRWQDYD QDLYVGATVV RPGQDPYARN KFNQVESDKL RMDRNIPDTR HDHCRHKQWR 

       130        140        150        160        170        180 
TDLPASSVVI TFHNEARSAL LRTVISVLKK SPPHLVKEII LVDDYSDNPE DGALLGKIEK 

       190        200        210        220        230        240 
VRVLRNDRRE GLMRSRVRGA DAATASVLTF LDSHCECNEH WLEPLLERVA EDKTRVVSPI 

       250        260        270        280        290        300 
IDVINMDNFQ YVGASADLKG GFDWNLVFKW DYMTLEQRRA RQGNPIAPIK TPMIAGGLFV 

       310        320        330        340        350        360 
MDKDYFEELG KYDMMMDVWG GENLEISFRV WQCGGSLEII PCSRVGHVFR KQHPYTFPGG 

       370        380        390        400        410        420 
SGTVFARNTR RAAEVWMDDF KNFYYAAVPS ARNVPYGNIQ SRLEMKKRLG CKPFKWYLEN 

       430        440        450        460        470        480 
VYPELRVPDH QDIAFGALQQ GQNCLDTLGH FADGVVGVYE CHNAGGNQEW ALTKDKSVKH 

       490        500        510        520        530        540 
MDLCLTVVDR TAGSQIKLQG CRENDTRQKW EQIDNNTKLR HVGSNLCLDS RSARSGGLTV 

       550 
EVCSPSLTQQ WKFTLNLQP

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References

[1]	Dyer L. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

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Cross-references

Sequence databases
	CR762497 Genomic DNA. Translation: CAQ15398.1.
IPI	IPI00615557.
RefSeq	NP_001121823.1.
UniGene	Dr.83159
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSDART00000021360; ENSDARP00000023613; ENSDARG00000003829; Danio rerio. [Genome view]
GeneID	570248.
KEGG	dre:570248.
Organism-specific databases
ZFIN	ZDB-GENE-041111-110. si:dkey-162b3.1.
Gene expression databases
Bgee	B0V0U4.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

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Entry information

Entry name

B0V0U4_DANRE

Accession

Primary (citable) accession number: B0V0U4

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	November 3, 2009
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Genome annotation databases

Organism-specific databases

Gene expression databases

Family and domain databases

Entry information