B0V0U4 (B0V0U4_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Novel protein simiar to human and murine UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (GALNT2) EMBL CAQ15398.1

Submitted name:
Si:dkey-162b3.1 Ensembl ENSDARP00000116568

Gene names

Name:	si:dkey-162b3.1 Ensembl ENSDARP00000116568 ZFIN ZDB-GENE-041111-110
Synonyms:	im:7140357 ZFIN ZDB-GENE-041111-110
ORF Names:	DKEY-162B3.1-001 EMBL CAQ15398.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAQ15398.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	559 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0V0U4 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: FDECD9DF8A163FE5	FASTA	559	63,954
	10 20 30 40 50 60 MRRKSRMYLC FAVLWVLGIA YYFYSGTTLS RKDDWSGINS NRIQTHSNAD DKDHSLESLP 70 80 90 100 110 120 LGKVRWQDYD QDLYVGATVV RPGQDPYARN KFNQVESDKL RMDRNIPDTR HDHCRHKQWR 130 140 150 160 170 180 TDLPASSVVI TFHNEARSAL LRTVISVLKK SPPHLVKEII LVDDYSDNPE DGALLGKIEK 190 200 210 220 230 240 VRVLRNDRRE GLMRSRVRGA DAATASVLTF LDSHCECNEH WLEPLLERVA EDKTRVVSPI 250 260 270 280 290 300 IDVINMDNFQ YVGASADLKG GFDWNLVFKW DYMTLEQRRA RQGNPIAPIK TPMIAGGLFV 310 320 330 340 350 360 MDKDYFEELG KYDMMMDVWG GENLEISFRV WQCGGSLEII PCSRVGHVFR KQHPYTFPGG 370 380 390 400 410 420 SGTVFARNTR RAAEVWMDDF KNFYYAAVPS ARNVPYGNIQ SRLEMKKRLG CKPFKWYLEN 430 440 450 460 470 480 VYPELRVPDH QDIAFGALQQ GQNCLDTLGH FADGVVGVYE CHNAGGNQEW ALTKDKSVKH 490 500 510 520 530 540 MDLCLTVVDR TAGSQIKLQG CRENDTRQKW EQIDNNTKLR HVGSNLCLDS RSARSGGLTV 550 EVCSPSLTQQ WKFTLNLQP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Dyer L. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000116568.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000116568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR762497 Genomic DNA. Translation: CAQ15398.1.
IPI	IPI00615557.
RefSeq	NP_001121823.1. NM_001128351.1.
UniGene	Dr.83159.
3D structure databases
ProteinModelPortal	B0V0U4.
SMR	B0V0U4. Positions 63-556.
ModBase	Search...
Protein-protein interaction databases
STRING	B0V0U4.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000136217; ENSDARP00000116568; ENSDARG00000003829.
GeneID	570248.
KEGG	dre:570248.
Organism-specific databases
ZFIN	ZDB-GENE-041111-110. si:dkey-162b3.1.
Phylogenomic databases
eggNOG	fiNOG10236.
GeneTree	ENSGT00560000076578.
HOGENOM	HBG715048.
HOVERGEN	HBG051699.
OMA	AKNTRRA.
OrthoDB	EOG4PG60H.
Gene expression databases
Bgee	B0V0U4.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
KO	K00710.
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0V0U4_DANRE

Accession

Primary (citable) accession number: B0V0U4

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)