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B0UW96 (B0UW96_HISS2) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:HSM_0291 EMBL ACA31922.1
OrganismHistophilus somni (strain 2336) (Haemophilus somnus) [Complete proteome] [HAMAP] EMBL ACA31922.1
Taxonomic identifier228400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHistophilus

Protein attributes

Sequence length269 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B0UW96 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 17448C88937785D6

FASTA26931,459
        10         20         30         40         50         60 
MRVSALFFML FIIKVQATLP DFMLLENYKN QDVSGWVMSE KLDGIRGYWD GKQLFTRQNK 

        70         80         90        100        110        120 
VIQPPHYFIR DFPPFAIDGE LFTERNQFEK ISSIVRSKKD KGWEKMKLYV FDVPNAQGNL 

       130        140        150        160        170        180 
FERLAVLQDY LDKHPTPYIQ IIEQIPIKTK QQVKNFLQQI EKQQGEGVVL RNPHATYERK 

       190        200        210        220        230        240 
RSTQILKLKT ALDEECTVIA HHQGKGQFEN MLGSISCQNH RGIFKIGSGF NLIERRNPPP 

       250        260 
IGSIITYKYR GLTKNGLPRF ATYWRSKKE 

« Hide

References

[1]"Complete sequence of Haemophilus somnus 2336."
US DOE Joint Genome Institute
Siddaramappa S., Duncan A.J., Challacombe J.F., Rainey D., Gillaspy A.F., Carson M., Gipson J., Gipson M., Bruce D., Detter J.C., Han C.S., Land M., Tapia R., Thompson L.S., Orvis J., Zaitshik J., Barnes G., Brettin T.S., Dyer D.W., Inzana T.J.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2336 EMBL ACA31922.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000947 Genomic DNA. Translation: ACA31922.1.
RefSeqYP_001783642.1. NC_010519.1.

3D structure databases

ProteinModelPortalB0UW96.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING228400.HSM_0291.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA31922; ACA31922; HSM_0291.
GeneID6108062.
KEGGhsm:HSM_0291.
PATRIC20197585. VBIHaeSom93646_0303.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
OrthoDBEOG60919Q.
ProtClustDBPRK09125.

Enzyme and pathway databases

BioCycHSOM228400:GHWT-301-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0UW96_HISS2
AccessionPrimary (citable) accession number: B0UW96
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 11, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)