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Protein

Protein TolB

Gene

tolB

Organism
Histophilus somni (strain 2336) (Haemophilus somnus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the TonB-independent uptake of proteins.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

BioCyciHSOM228400:GHWT-138-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TolBUniRule annotation
Gene namesi
Name:tolBUniRule annotation
Ordered Locus Names:HSM_0135
OrganismiHistophilus somni (strain 2336) (Haemophilus somnus)
Taxonomic identifieri228400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHistophilus
Proteomesi
  • UP000008543 Componenti: Chromosome

Subcellular locationi

  • Periplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424UniRule annotationAdd
BLAST
Chaini25 – 434410Protein TolBPRO_5000311140Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliB0UVJ6.
SMRiB0UVJ6. Positions 28-432.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TolB family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000004098.
KOiK03641.
OMAiVREPSWG.
OrthoDBiEOG679T7X.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 4 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B0UVJ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFSAYLTTL FIVLFSLFIQ TVQAESEVRI VIDEGVDSAR PIAIIPFKWN
60 70 80 90 100
GSDSMPIDVA DIISADLRNS GKFNPIAVSK MPQKPTSASE VISDVWSSLG
110 120 130 140 150
IDAVVVGQVT PNEKGYSIAY QLVDTIGASG NSGEVLSQNQ YAVPKNAIRL
160 170 180 190 200
GAHTISDEVF EKLTAIRGAF RTKIAYVVQK NGGSKPYQVR IADYDGHNQF
210 220 230 240 250
IVYSSSQPLM SPAWSPDGSK LAYVSFENRK SQLIVHDLQS GARRVIAAFP
260 270 280 290 300
GHNGAPAFSP DGSKIAFASS KDGVLNIYVM NLGNGTISQL TSGAGNNTEP
310 320 330 340 350
SWSPDGQSII FTSDRAGGPQ IYQMDVVGNG VSLVSAGRGY SGKISADGSI
360 370 380 390 400
LVMIYGDNIV KKDLATGVTE MLSSTFLDES PSISPNGIMI IYSSTQGLGK
410 420 430
VLQLVSADGR FKARLPSSDG QIKFPAWSPY LNKN
Length:434
Mass (Da):46,356
Last modified:April 8, 2008 - v1
Checksum:iD0E627B336605561
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000947 Genomic DNA. Translation: ACA31085.1.
RefSeqiWP_012340504.1. NC_010519.1.

Genome annotation databases

EnsemblBacteriaiACA31085; ACA31085; HSM_0135.
KEGGihsm:HSM_0135.
PATRICi20197245. VBIHaeSom93646_0141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000947 Genomic DNA. Translation: ACA31085.1.
RefSeqiWP_012340504.1. NC_010519.1.

3D structure databases

ProteinModelPortaliB0UVJ6.
SMRiB0UVJ6. Positions 28-432.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA31085; ACA31085; HSM_0135.
KEGGihsm:HSM_0135.
PATRICi20197245. VBIHaeSom93646_0141.

Phylogenomic databases

HOGENOMiHOG000004098.
KOiK03641.
OMAiVREPSWG.
OrthoDBiEOG679T7X.

Enzyme and pathway databases

BioCyciHSOM228400:GHWT-138-MONOMER.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 4 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2336.

Entry informationi

Entry nameiTOLB_HISS2
AccessioniPrimary (citable) accession number: B0UVJ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: April 8, 2008
Last modified: May 11, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.