B0UUD5 (B0UUD5_HAES2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

HSM_1414

Organism

Haemophilus somnus (strain 2336) (Histophilus somni (strain 2336)) [Complete proteome] [HAMAP] EMBL ACA31157.1

Taxonomic identifier

228400 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Histophilus › Haemophilus somnus

Protein attributes

Sequence length	359 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACA31157.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0UUD5 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 6F30F9602F6C7468	FASTA	359	40,023
	10 20 30 40 50 60 MNVIPPTARI SSVALKHNIQ VIKQKAKNSK VIAIVKANAY GHGLEFVSST LHHLVDCFGV 70 80 90 100 110 120 ARLSEALRLC TEGITKPILL LEGFFSEDDL PIIAVNNIQT VIHNQEQLYV LKKAKLPNKI 130 140 150 160 170 180 KVWLKIDTGM HRLGVDLEQV EDFYQQLVQC SNVKEIGFLS HFSRADELMC GYTEIQLERF 190 200 210 220 230 240 LQVTEGKQGE RSIVASSGIL FWQQAYLDWI RPGIIMYGIS PNNTPAEVYG LIPVMTLTSS 250 260 270 280 290 300 LITIRNHKKG EPVGYGGSWI SERDTKIGVV AIGYGDGYPR DMPQGTPVYI NGRKVPIVGR 310 320 330 340 350 VSMDMLTVDL GIESQDKVGD EVILWGKELP IEEISAISGM ISYELITKLT PRVLIEYID

References

[1]

"Complete sequence of Haemophilus somnus 2336." US DOE Joint Genome Institute Siddaramappa S., Duncan A.J., Challacombe J.F., Rainey D., Gillaspy A.F., Carson M., Gipson J., Gipson M., Bruce D., Detter J.C., Han C.S., Land M., Tapia R., Thompson L.S., Orvis J., Zaitshik J., Barnes G., Brettin T.S., Dyer D.W., Inzana T.J. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2336.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000947 Genomic DNA. Translation: ACA31157.1.
RefSeq	YP_001784734.1. NC_010519.1.
3D structure databases
ProteinModelPortal	B0UUD5.
ModBase	Search...
Protein-protein interaction databases
STRING	228400.HSM_1414.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACA31157; ACA31157; HSM_1414.
GeneID	6107294.
KEGG	hsm:HSM_1414.
PATRIC	20200044. VBIHaeSom93646_1491.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031446.
KO	K01775.
OMA	SWISERD.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	HSOM228400:GHWT-457-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0UUD5_HAES2

Accession

Primary (citable) accession number: B0UUD5

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)