B0UP51 (B0UP51_METS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endonuclease III EMBL ACA18598.1
EC=4.2.99.18 EMBL ACA18598.1

Gene names

Ordered Locus Names:

M446_4249 EMBL ACA18598.1

Organism

Methylobacterium sp. (strain 4-46) [Complete proteome] [HAMAP] EMBL ACA18598.1

Taxonomic identifier

426117 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length	249 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Endonuclease EMBL ACA18598.1 Hydrolase Lyase EMBL ACA18598.1 Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0UP51 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 779662452BF77AA9	FASTA	249	26,804
	10 20 30 40 50 60 MTRRKRDAPT KVKAAGAALV APPTVPPTAP ARAPEPVDAA TLAEIFARLS AANPSPRSDL 70 80 90 100 110 120 EYLNPYTLLV AVVLSAQATD RSVNLATRDL FAKADHPAAM LALGEEVVRA HIRTIGLFNT 130 140 150 160 170 180 KARNVIALSA ILVAEHGGAV PRRREDLEVL PGVGRKTASV VLNVAFGEPT IAVDTHIFRV 190 200 210 220 230 240 SNRIPLAPGT TTDKVQEGLE AIVPEPYRLN AHHWLILHGR YTCKARKPEC WRCVIADLCR YPDKTAAGA

References

[1]

"Complete sequence of chromosome of Methylobacterium sp. 4-46." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Ivanova N., Marx C.J., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 4-46 EMBL ACA18598.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000943 Genomic DNA. Translation: ACA18598.1.
RefSeq	YP_001771032.1. NC_010511.1.
3D structure databases
ProteinModelPortal	B0UP51.
SMR	B0UP51. Positions 40-245.
ModBase	Search...
Protein-protein interaction databases
STRING	426117.M446_4249.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACA18598; ACA18598; M446_4249.
GeneID	6132253.
KEGG	met:M446_4249.
PATRIC	22589672. VBIMetSp32184_4170.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0177.
HOGENOM	HOG000252206.
KO	K10773.
OMA	NNKSKHL.
ProtClustDB	CLSK2330289.
Enzyme and pathway databases
BioCyc	MSP426117:GI2I-4290-MONOMER.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR004036. Endonuclease-III_CS2. IPR005759. Endonuclease-III_Nth. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR000445. HhH_motif. IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF10576. EndIII_4Fe-2S. 1 hit. PF00633. HHH. 1 hit. PF00730. HhH-GPD. 1 hit. [Graphical view]
PIRSF	PIRSF001435. Nth. 1 hit.
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. SM00278. HhH1. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
TIGRFAMs	TIGR01083. nth. 1 hit.
PROSITE	PS01155. ENDONUCLEASE_III_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0UP51_METS4

Accession

Primary (citable) accession number: B0UP51

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)