B0U4W1 (B0U4W1_XYLFM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675

Gene names

Ordered Locus Names:

Xfasm12_2009

Organism

Xylella fastidiosa (strain M12) [Complete proteome] [HAMAP]

Taxonomic identifier

405440 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length	612 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Domain	Signal EMBL ACA12878.1
Molecular function	Glycosidase RuleBase RU000675 EMBL ACA12878.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL ACA12878.1
	Chain	24 – 612	589	Potential EMBL ACA12878.1		PRO_5000309443

Sequences

	Sequence		Length	Mass (Da)
	B0U4W1 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 896422403DE04691	FASTA	612	67,948
	10 20 30 40 50 60 MLRHLLTLPL IFAIALPIGV SAAPWPAFST RGTQFIRDGR PYQLISGAIH FQRIPRAYWK 70 80 90 100 110 120 DRLQKARAMG LNTVETYVFW NLVELREGQF DFTGNNDIGA FVREAASQGL NVILRPGPYV 130 140 150 160 170 180 CAEWEAGGFP AWLFADPTLR VRSQDPRFLD ASQRYLEALG TQVRPLLNSN GGPIIAMQVE 190 200 210 220 230 240 NEYGSYGDDH GYLQAVRALF IKAGLGGALL FTSDGAQMLG NGTLPDVLAA VNVAPGEAKQ 250 260 270 280 290 300 ALDKLATFHP GQPQLVGEYW AGWFDQWGKP HAQTDAKQQA DEIEWMLRQG HSINLYMFVG 310 320 330 340 350 360 GTSFGFMNGA NFQGGPGDHY SPQTTSYDYD AALDEAGRPM PKFALFRDVI TGVTGLQPPP 370 380 390 400 410 420 LPAATRFIDL PDTPLRASAS LWDNLPAAVA TSADPQPMER YGQAYGYILY RTTIHGPRKG 430 440 450 460 470 480 RLYLGEVRDD AHVYVDRLFV GRAERRRQQV WVEVDIPSGT HRLDVLVENS GRVNYGPHLA 490 500 510 520 530 540 DGRAGLIGPV MLNHERVNNW ETFLLPLQTP EAIHGWTTAP MQGPAFHRGT LFIRTPGDTF 550 560 570 580 590 600 LDMEAFSKGV TWANGHMLGR YWDIGPQRAL YFPGAWQRQG ENTVLVFDVS DTAAAQVRGV 610 QQQRWITPRT AK

References

[1]

"Whole genome sequences of two Xylella fastidiosa strains (M12 and M23) causing almond leaf scorch disease in California." Chen J., Xie G., Han S., Chertkov O., Sims D., Civerolo E.L. J. Bacteriol. 192:4534-4534(2010) [PubMed: 20601474] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000941 Genomic DNA. Translation: ACA12878.1.
RefSeq	YP_001776508.1. NC_010513.1.
3D structure databases
ProteinModelPortal	B0U4W1.
ModBase	Search...
Protein-protein interaction databases
STRING	B0U4W1.
Protein family/group databases
CAZy	GH35. Glycoside Hydrolase Family 35.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6121093.
GenomeReviews	Gene locus Xfasm12_2009 in contig CP000941_GR.
KEGG	xfm:Xfasm12_2009.
PATRIC	24140835. VBIXylFas124301_2358.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG292753.
OMA	ENMGRVS.
ProtClustDB	CLSK881272.
Enzyme and pathway databases
BioCyc	XFAS405440:XFASM12_2009-MONOMER.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_subgr_catalytic. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K12308.
PANTHER	PTHR23421. Glyco_hydro_35. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0U4W1_XYLFM

Accession

Primary (citable) accession number: B0U4W1

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)