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Protein

UPF0176 protein Fphi_1841

Gene

Fphi_1841

Organism
Francisella philomiragia subsp. philomiragia (strain ATCC 25017)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei177 – 1771Cysteine persulfide intermediateUniRule annotation

Enzyme and pathway databases

BioCyciFPHI484022:GHVB-1897-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein Fphi_1841UniRule annotation
Gene namesi
Ordered Locus Names:Fphi_1841
OrganismiFrancisella philomiragia subsp. philomiragia (strain ATCC 25017)
Taxonomic identifieri484022 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
Proteomesi
  • UP000001320 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 330330UPF0176 protein Fphi_1841PRO_1000081189Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi484022.Fphi_1841.

Structurei

3D structure databases

ProteinModelPortaliB0U150.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini123 – 21795RhodaneseUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0U150-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQIVVCAMY KFVTLEDYEA MRQPLLDTMI KNNVKGTLLL ANEGINGTVA
60 70 80 90 100
GSREGVNALL AYLKSDSRLA DIDYKESYHQ EMPFYRSKVK LKKEIVTLGI
110 120 130 140 150
EEIDPNKVCG KYVEPKDWNA LISDPETILV DTRNDYEIEI GTFKNAINPS
160 170 180 190 200
TETFREFPEY VDKNLDPKKH KKVAMFCTGG IRCEKSTALM KAKGFDEVYH
210 220 230 240 250
LKGGILKYLE EVPKEESMWE GECFVFDSRV AVNHDLEKGS YDQCFACRMP
260 270 280 290 300
ITEEDKKRPE YVKGISCHHC YDKVTEEQKA RFAEREKQSQ LAAERGFSHV
310 320 330
GDDAKKLAKL NKQQKQQAKE IARKKAKSEI
Length:330
Mass (Da):37,797
Last modified:April 8, 2008 - v1
Checksum:iCF8ED4DD2B2F7556
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000937 Genomic DNA. Translation: ABZ88069.1.
RefSeqiWP_004287839.1. NC_010336.1.

Genome annotation databases

EnsemblBacteriaiABZ88069; ABZ88069; Fphi_1841.
KEGGifph:Fphi_1841.
PATRICi17940681. VBIFraPhi43880_1907.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000937 Genomic DNA. Translation: ABZ88069.1.
RefSeqiWP_004287839.1. NC_010336.1.

3D structure databases

ProteinModelPortaliB0U150.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi484022.Fphi_1841.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ88069; ABZ88069; Fphi_1841.
KEGGifph:Fphi_1841.
PATRICi17940681. VBIFraPhi43880_1907.

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.
OrthoDBiEOG6ND0G7.

Enzyme and pathway databases

BioCyciFPHI484022:GHVB-1897-MONOMER.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Francisella philomiragia subsp. philomiragia ATCC 25017."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Richardson P.
    Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25017.

Entry informationi

Entry nameiY1846_FRAP2
AccessioniPrimary (citable) accession number: B0U150
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: April 8, 2008
Last modified: November 11, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.