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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Shewanella halifaxensis (strain HAW-EB4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-714-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:Shal_0698
OrganismiShewanella halifaxensis (strain HAW-EB4)
Taxonomic identifieri458817 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001317 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 341341Ribosomal RNA small subunit methyltransferase CPRO_0000369772Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi458817.Shal_0698.

Structurei

3D structure databases

ProteinModelPortaliB0TSU8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.

Sequencei

Sequence statusi: Complete.

B0TSU8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTNASQVLL RNRDLVKDQS VLVLNYEGDH LPKELLNTAR SVCGLALDYH
60 70 80 90 100
HHLMMQPYAA ANLTLHFGHQ LPNDESFDTV IVYFPKAKAL APYLFNLAAK
110 120 130 140 150
HLKPQGQLIV VGENKGGIKS LPKQLPSYFD KPFKADNARH CIVFLSELNA
160 170 180 190 200
AAPTLKLTDW ISRYQLDTPQ GQVTICNLVG VFSEKKLDEG TKLLLENLPK
210 220 230 240 250
MRGKVLDFGC GAGVIAAALL KAQPELTLEC VDINAMALAS CEFTLQANGF
260 270 280 290 300
NAKIFASDGL AQAAGRYDGI ISNPPFHDGL ASTTNIATNF VKDSAANLTT
310 320 330 340
GGLFHIVANR HLPYSDTIAE HFGSVDVTAE NNKYKIYSNV K
Length:341
Mass (Da):37,238
Last modified:April 8, 2008 - v1
Checksum:i9E63164BB8069157
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000931 Genomic DNA. Translation: ABZ75273.1.
RefSeqiWP_012275827.1. NC_010334.1.

Genome annotation databases

EnsemblBacteriaiABZ75273; ABZ75273; Shal_0698.
KEGGishl:Shal_0698.
PATRICi23503872. VBISheHal24697_0732.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000931 Genomic DNA. Translation: ABZ75273.1.
RefSeqiWP_012275827.1. NC_010334.1.

3D structure databases

ProteinModelPortaliB0TSU8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi458817.Shal_0698.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ75273; ABZ75273; Shal_0698.
KEGGishl:Shal_0698.
PATRICi23503872. VBISheHal24697_0732.

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiPOG091H05RK.

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-714-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMC_SHEHH
AccessioniPrimary (citable) accession number: B0TSU8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 8, 2008
Last modified: September 7, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.