B0TQ19 (B0TQ19_SHEHH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase EMBL ABZ76298.1
EC=4.4.1.8 EMBL ABZ76298.1

Gene names

Ordered Locus Names:

Shal_1732

Organism

Shewanella halifaxensis (strain HAW-EB4) [Complete proteome] [HAMAP] EMBL ABZ76298.1

Taxonomic identifier

458817 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	406 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABZ76298.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	cystathionine beta-lyase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0TQ19 [UniParc]. Last modified April 8, 2008. Version 1. Checksum: 206803307BF8C99E	FASTA	406	45,280
	10 20 30 40 50 60 MLRWLKIQTN GIRPMKKETQ IISLGRDKKW TQGVINPPVY RASTMVFDTM EDLRFAAKNK 70 80 90 100 110 120 ANGELFYGRR GGPTHFAFQA AIAELEGGVG TALYPSGSAA ISNSLLSFLK AGDHLLMVDS 130 140 150 160 170 180 VYEPTRDLCH KLLAGYGIET TYYDPMIGDG IEALIQPNTK VLFLESPGSI TMEVQDVPTL 190 200 210 220 230 240 SRIAHQHDIV VMLDNTWASP INSRPFEMGV DISIQAATKY IVGHSDVMMG TATANEKHWE 250 260 270 280 290 300 QLRENSYLLG QCTSPDDVYL ASRGLRTLGI RLAQHEQNAL KVANWLASRP EVDHLRHPAF 310 320 330 340 350 360 ESCPGHEFFK RDFSASNGLF SFVLKQGDVH SVTAFVENMQ HFKMGFSWGG FESLILGVFG 370 380 390 400 IDKLRTATQW DSSKPLIRLH IGLENVDDLI ADLEAAFERY NRVLNA

References

[1]

"Complete sequence of Shewanella halifaxensis HAW-EB4." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Zhao J.-S., Richardson P. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HAW-EB4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000931 Genomic DNA. Translation: ABZ76298.1.
RefSeq	YP_001673957.1. NC_010334.1.
3D structure databases
ProteinModelPortal	B0TQ19.
SMR	B0TQ19. Positions 16-400.
ModBase	Search...
Protein-protein interaction databases
STRING	B0TQ19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5903175.
GenomeReviews	Gene locus Shal_1732 in contig CP000931_GR.
KEGG	shl:Shal_1732.
PATRIC	23506137. VBISheHal24697_1819.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG754729.
OMA	REQSYLM.
ProtClustDB	PRK09028.
Enzyme and pathway databases
BioCyc	SHAL458817:SHAL_1732-MONOMER.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR006233. Cys_b_lyase_bac. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808:SF8. Cys_b_lyase_bac. 1 hit. PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0TQ19_SHEHH

Accession

Primary (citable) accession number: B0TQ19

Entry history

Integrated into UniProtKB/TrEMBL:	April 8, 2008
Last sequence update:	April 8, 2008
Last modified:	January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)