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B0TPE4 (B0TPE4_SHEHH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shal_3043 EMBL ABZ77591.1
OrganismShewanella halifaxensis (strain HAW-EB4) [Complete proteome] [HAMAP] EMBL ABZ77591.1
Taxonomic identifier458817 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B0TPE4 [UniParc].

Last modified April 8, 2008. Version 1.
Checksum: 36E4102AEFD4FC78

FASTA46452,394
        10         20         30         40         50         60 
MPLHSKDTVR DDLLDDIYSS TDLALSMPKY KMPEQENNSR HAYQIVHDEL MMDGNSRQNL 

        70         80         90        100        110        120 
ATFCQTWVED EVHQLMDECI DKNMIDKDEY PQTAELEARC VHMLADLWNS PDAENTLGCS 

       130        140        150        160        170        180 
TTGSSEAAML GGMALKWAWR KKMKALGKPT DKPNMICGPV QVCWHKFARY WDIELREIPM 

       190        200        210        220        230        240 
EGDRLIMNAE EVIKRCDENT IGVVPTLGVT FTCQYEPVKA VHDALDQLQK DTGLDIPMHV 

       250        260        270        280        290        300 
DAASGGFLAP FCQPDLEWDF KLPRVKSINA SGHKFGLSPL GVGWVIWRDA SVLDEDLIFN 

       310        320        330        340        350        360 
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGKEGYRKI HQACYDTAQY LSSEIEKLGM 

       370        380        390        400        410        420 
FEIIYDGHGG IPAMSWSLKE GVDPGFNLFD LSDRIRSRGW QIAAYAMPPK REDLVIMRIL 

       430        440        450        460 
VRHGFSRDQA DLLVADLKHC VDFFASHPIS HGSDAKESSG FNHG 

« Hide

References

[1]"Complete sequence of Shewanella halifaxensis HAW-EB4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Kim E., Zhao J.-S., Richardson P.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAW-EB4 EMBL ABZ77591.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000931 Genomic DNA. Translation: ABZ77591.1.
RefSeqYP_001675250.1. NC_010334.1.

3D structure databases

ProteinModelPortalB0TPE4.
SMRB0TPE4. Positions 7-448.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING458817.Shal_3043.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABZ77591; ABZ77591; Shal_3043.
GeneID5903962.
KEGGshl:Shal_3043.
PATRIC23508973. VBISheHal24697_3194.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAPTFQINF.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycSHAL458817:GH1X-3143-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0TPE4_SHEHH
AccessionPrimary (citable) accession number: B0TPE4
Entry history
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)