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B0TMM4

- B0TMM4_SHEHH

UniProt

B0TMM4 - B0TMM4_SHEHH

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Protein

Alanine racemase

Gene

Shal_2833

Organism
Shewanella halifaxensis (strain HAW-EB4)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotation

Cofactori

Pyridoxal phosphate.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei73 – 731Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei172 – 1721SubstrateUniRule annotation
Active sitei298 – 2981Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei346 – 3461Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-2933-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Shal_2833Imported
OrganismiShewanella halifaxensis (strain HAW-EB4)Imported
Taxonomic identifieri458817 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001317: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei73 – 731N6-(pyridoxal phosphate)lysineUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi458817.Shal_2833.

Structurei

3D structure databases

ProteinModelPortaliB0TMM4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000279190.
KOiK01775.
OMAiQQIPCVA.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0TMM4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKTKYTIIAM FVASIGSFST VAAPFLPSDG VSPVEAVQAA NSWLEVNLTQ
60 70 80 90 100
FDSNIKELKN HIQSNVKVCA IMKADAYGNG IAGLMPTVLA NNIPCIGVTS
110 120 130 140 150
NEEIRIVRDA GFRGSLIRVR SASIAEISDT LQYDVEEFVG DANQATLLSA
160 170 180 190 200
MAAKLDKPLK VHLVLNSGGM GRNGVDVSTQ SGLNEAVQIA TTADLDVVGI
210 220 230 240 250
MTHFPSYDRD DVLVKSKSFY NSALNIIEES GLKRDSVTIH SGNSYVALNV
260 270 280 290 300
PEAHFDMVRP GGVLYGDQPT NPEFPSIVTF KTRIASLVDL PKGATVGYDS
310 320 330 340 350
TIKLERESLL ANLPVGYSDS FPRKMGNTAD VLVNGQRAKV MGVISMNTSM
360 370 380 390 400
IDVTDLSGVK EGDEVVLFGY QGKESILAPE FEKNADVIFP EIYTQWGQTN

PRIYVK
Length:406
Mass (Da):43,841
Last modified:April 8, 2008 - v1
Checksum:iC4D83068A2A3029E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000931 Genomic DNA. Translation: ABZ77384.1.
RefSeqiWP_012277911.1. NC_010334.1.
YP_001675043.1. NC_010334.1.

Genome annotation databases

EnsemblBacteriaiABZ77384; ABZ77384; Shal_2833.
GeneIDi5902952.
KEGGishl:Shal_2833.
PATRICi23508539. VBISheHal24697_2977.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000931 Genomic DNA. Translation: ABZ77384.1 .
RefSeqi WP_012277911.1. NC_010334.1.
YP_001675043.1. NC_010334.1.

3D structure databases

ProteinModelPortali B0TMM4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 458817.Shal_2833.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABZ77384 ; ABZ77384 ; Shal_2833 .
GeneIDi 5902952.
KEGGi shl:Shal_2833.
PATRICi 23508539. VBISheHal24697_2977.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000279190.
KOi K01775.
OMAi QQIPCVA.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SHAL458817:GH1X-2933-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HAW-EB4Imported.

Entry informationi

Entry nameiB0TMM4_SHEHH
AccessioniPrimary (citable) accession number: B0TMM4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3