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B0TMM4

- B0TMM4_SHEHH

UniProt

B0TMM4 - B0TMM4_SHEHH

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Protein
Alanine racemase
Gene
Shal_2833
Organism
Shewanella halifaxensis (strain HAW-EB4)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei73 – 731Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei172 – 1721Substrate By similarityUniRule annotation
Active sitei298 – 2981Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei346 – 3461Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-2933-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Shal_2833Imported
OrganismiShewanella halifaxensis (strain HAW-EB4)Imported
Taxonomic identifieri458817 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001317: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei73 – 731N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi458817.Shal_2833.

Structurei

3D structure databases

ProteinModelPortaliB0TMM4.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000279190.
KOiK01775.
OMAiQQIPCVA.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0TMM4-1 [UniParc]FASTAAdd to Basket

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MKTKYTIIAM FVASIGSFST VAAPFLPSDG VSPVEAVQAA NSWLEVNLTQ    50
FDSNIKELKN HIQSNVKVCA IMKADAYGNG IAGLMPTVLA NNIPCIGVTS 100
NEEIRIVRDA GFRGSLIRVR SASIAEISDT LQYDVEEFVG DANQATLLSA 150
MAAKLDKPLK VHLVLNSGGM GRNGVDVSTQ SGLNEAVQIA TTADLDVVGI 200
MTHFPSYDRD DVLVKSKSFY NSALNIIEES GLKRDSVTIH SGNSYVALNV 250
PEAHFDMVRP GGVLYGDQPT NPEFPSIVTF KTRIASLVDL PKGATVGYDS 300
TIKLERESLL ANLPVGYSDS FPRKMGNTAD VLVNGQRAKV MGVISMNTSM 350
IDVTDLSGVK EGDEVVLFGY QGKESILAPE FEKNADVIFP EIYTQWGQTN 400
PRIYVK 406
Length:406
Mass (Da):43,841
Last modified:April 8, 2008 - v1
Checksum:iC4D83068A2A3029E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000931 Genomic DNA. Translation: ABZ77384.1.
RefSeqiWP_012277911.1. NC_010334.1.
YP_001675043.1. NC_010334.1.

Genome annotation databases

EnsemblBacteriaiABZ77384; ABZ77384; Shal_2833.
GeneIDi5902952.
KEGGishl:Shal_2833.
PATRICi23508539. VBISheHal24697_2977.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000931 Genomic DNA. Translation: ABZ77384.1 .
RefSeqi WP_012277911.1. NC_010334.1.
YP_001675043.1. NC_010334.1.

3D structure databases

ProteinModelPortali B0TMM4.
ModBasei Search...

Protein-protein interaction databases

STRINGi 458817.Shal_2833.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABZ77384 ; ABZ77384 ; Shal_2833 .
GeneIDi 5902952.
KEGGi shl:Shal_2833.
PATRICi 23508539. VBISheHal24697_2977.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000279190.
KOi K01775.
OMAi QQIPCVA.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SHAL458817:GH1X-2933-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HAW-EB4Imported.

Entry informationi

Entry nameiB0TMM4_SHEHH
AccessioniPrimary (citable) accession number: B0TMM4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: September 3, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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