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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Shewanella halifaxensis (strain HAW-EB4)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381UniRule annotation
Active sitei545 – 5451UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-4228-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Shal_4095
OrganismiShewanella halifaxensis (strain HAW-EB4)
Taxonomic identifieri458817 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001317 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 878878Phosphoenolpyruvate carboxylasePRO_1000082434Add
BLAST

Proteomic databases

PRIDEiB0TL90.

Interactioni

Protein-protein interaction databases

STRINGi458817.Shal_4095.

Structurei

3D structure databases

ProteinModelPortaliB0TL90.
SMRiB0TL90. Positions 5-878.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0TL90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVDMYASLRS NVGTLGQILG DTIRTDLDDT FLDKIEQIRH LAKSSRQGDS
60 70 80 90 100
AARKEMLTLL SSLSDDELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC
110 120 130 140 150
VPDPVEQLLG RMLGGNIDQE KVLACLKTLD IDLVLTAHPT EISRRTLIQK
160 170 180 190 200
YSAVIDSLTA QENTQLTEQE KKQHHLRLRQ LIAQIWHTNE IRNERPTPVD
210 220 230 240 250
EARWGLCTIE ASLWQAVPDF LRQLNQQVEE RTNTQLPTDI APVRFSSWMG
260 270 280 290 300
GDRDGNPFVT SAVTQEVLDR NRHTAARLYL KDVVLLVNEL SMEGANEALL
310 320 330 340 350
AYTNNSNEPY RDVLRTLRQK LRNTIDYLNG RLEGQHPDVD PSEIIWHESD
360 370 380 390 400
LKDPLMMLYQ SLCDRGMSLI ANGLLLDMLR RIACFGIHML RLDVRQDADR
410 420 430 440 450
HADVIAELTR YLGMGDYAHW DETEKQSFLL RELSSKRPLI PANWQASPEV
460 470 480 490 500
EEVVKTCRLV ATQPARAMGS YVISMASQPS DVLAVLLLLK ETGCPHPMRV
510 520 530 540 550
VPLFETLDDL NNASACMSAL FSIDWYRGYT KGIQEVMIGY SDSAKDAGVM
560 570 580 590 600
AAAWAQYTAQ EKLVAISQEA NIKLTLFHGR GGTIGRGGGP AHEAILSQPP
610 620 630 640 650
GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP
660 670 680 690 700
EWRQCMQQLA EESVLAYRAI VREEPDFVSY FRAATPEIEL GKLPLGSRPA
710 720 730 740 750
KRRVDGGIES LRAIPWIFAW SQNRLMLPAW LGAGEALKAA SERGDLPLLQ
760 770 780 790 800
EMEKHWPFFK TRISMLEMVY AKAEPNLSKF YETSLVPKEL HHLGVQLRER
810 820 830 840 850
LAIGIEAVLE LTQAESLMAH TPWNRESVEL RNPYIDPLNF LQAELLARTR
860 870
REEQSSKNVE LALMLTIAGV AAGMRNTG
Length:878
Mass (Da):98,771
Last modified:April 7, 2008 - v1
Checksum:i028030C8F374DDDB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000931 Genomic DNA. Translation: ABZ78635.1.
RefSeqiWP_012279152.1. NC_010334.1.
YP_001676294.1. NC_010334.1.

Genome annotation databases

EnsemblBacteriaiABZ78635; ABZ78635; Shal_4095.
KEGGishl:Shal_4095.
PATRICi23511230. VBISheHal24697_4288.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000931 Genomic DNA. Translation: ABZ78635.1.
RefSeqiWP_012279152.1. NC_010334.1.
YP_001676294.1. NC_010334.1.

3D structure databases

ProteinModelPortaliB0TL90.
SMRiB0TL90. Positions 5-878.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi458817.Shal_4095.

Proteomic databases

PRIDEiB0TL90.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABZ78635; ABZ78635; Shal_4095.
KEGGishl:Shal_4095.
PATRICi23511230. VBISheHal24697_4288.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciSHAL458817:GH1X-4228-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HAW-EB4.

Entry informationi

Entry nameiCAPP_SHEHH
AccessioniPrimary (citable) accession number: B0TL90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 19, 2008
Last sequence update: April 7, 2008
Last modified: March 31, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.